Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq60 96.9 4e-15 >seq60 Length=14545593 Score = 96.9 bits (106), Expect = 4e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| ||||||||||| || || || ||||| || | ||||||||| ||||||||||| Sbjct 8429094 CCTCATCTCTGCTGATCAGCTCATTGGAAAACGTGAGGCCGGGCATCAGTCCTCGTTTCT 8429035 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||| ||||||| || || || ||||||||||| || || || || | ||||| | Sbjct 8429034 TGAGCCAGAATATCGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGG 8428975 Query 17106 C 17106 | Sbjct 8428974 C 8428974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517525629209160