Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq14 87.8 2e-12 >seq14 Length=35217250 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 29056 ATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAG 29115 |||| ||||| | || | ||||| |||||||| |||||||| ||||| |||||||||| Sbjct 7097734 ATAAGGAAGGAATTCCTCTTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAG 7097675 Query 29116 ATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 || ||| || | || ||||| ||||| ||||| || |||||||| | ||||| Sbjct 7097674 ATGGACGTACTTTGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 7097617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428319884794985