Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq7 104 4e-17
>seq7
Length=57674156
Score = 104 bits (114), Expect = 4e-17
Identities = 108/138 (78%), Gaps = 4/138 (3%)
Strand=Plus/Minus
Query 52052 GTCAGGCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATT 52111
|||| |||||||||||||| ||| | ||||| || |||||||| |||||||| | || |
Sbjct 6004528 GTCAAGCATTTTTTGGAGCCCAGTTGAATTCCTTCATCCATGTGGTTATGTACTCCTACT 6004469
Query 52112 ATGGTATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCT 52169
|||| | | || | ||| || ||| ||||| |||||||| ||||||||||| || ||
Sbjct 6004468 ATGGGTTAACTGCGTTTGG-CCCATGGATTCAG-AAGTATCTTTGGTGGAAACGATACCT 6004411
Query 52170 TACTATAATGCAGTTGGT 52187
||||| ||||| ||||
Sbjct 6004410 GACTATGTTGCAGCTGGT 6004393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923161176143480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |