Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq25 84.2 1e-11
>seq25
Length=29395486
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 34203 TCTGTATGTTGTAGTCGGACAGC-TGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
|||| | ||||||||| || || ||| || | || || | |||||||||||| || |||
Sbjct 9574085 TCTGGAGGTTGTAGTCAGAAAGAGTGA-GGCCATCTTCTAGCTGCTTGCCTGCAAAGATG 9574143
Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321
|||| ||||||||| || | || || || || ||||| || | || |
Sbjct 9574144 AGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTCCACATTCTCC 9574203
Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381
|| | ||| | | ||| || |||| |||||||| |||||||| || || ||||| |||
Sbjct 9574204 ATGGTATCACTGGGTTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAG 9574263
Query 34382 ATCTGCAT 34389
|| |||||
Sbjct 9574264 ATTTGCAT 9574271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323059845122720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |