Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq14 86.0 4e-12
>seq14
Length=35217250
Score = 86.0 bits (94), Expect = 4e-12
Identities = 152/219 (69%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 33157 CAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC 33216
|||||| | ||| | || ||||| ||||| || ||||| ||||||||| | || ||
Sbjct 7097616 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 7097675
Query 33217 ATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT-TT 33275
|||| |||||| ||| ||| || | | |||||| || || || ||||| || ||
Sbjct 7097676 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAAGAGGAATTCCTTCCTTATT 7097735
Query 33276 C--GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTAT 33333
| | | | |||| || | ||| || | || ||||| ||| || |||| ||
Sbjct 7097736 CTGGATCTTGGCCT---TTGCACTTTCTATTATATCCGAGGGTTCAACCTCGAGAGCGAT 7097792
Query 33334 CGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
|| ||||||||||| |||| |||||||| ||||| ||
Sbjct 7097793 GGTCTTTCCCGTAAGGATTTTCACGAAAATCTGCATCTT 7097831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318765606690126
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |