Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq15 132 4e-26 >seq15 Length=34426505 Score = 132 bits (146), Expect = 4e-26 Identities = 117/146 (80%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || | || |||||||| ||||||||| |||| ||||||||| Sbjct 31359038 GGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGATG 31359097 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || ||||| || || ||||| || |||||||| |||||||| ||||| ||||| |||||| Sbjct 31359098 CCCCAGGCTGAGAACCACGGCCCAGACATCAAGGAGCACGTGAACTCTCTGGGGGAAAAG 31359157 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCG 129019 || || || ||| | || | ||||| Sbjct 31359158 CTGAAGACCCTGAGGCTGAGGCTGCG 31359183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447733122431440