Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq15 122 7e-23 >seq15 Length=34426505 Score = 122 bits (134), Expect = 7e-23 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 31359047 GGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGATGCCCCAGGCT 31359106 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || ||||| || ||||| || || ||||| || || ||||| |||||||||||||| Sbjct 31359107 GAGAACCACGGCCCAGACATCAAGGAGCACGTGAACTCTCTGGGGGAAAAGCTGAAGACC 31359166 Query 127291 TTGAGACTTCGACTGCG 127307 |||| || | ||||| Sbjct 31359167 CTGAGGCTGAGGCTGCG 31359183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430038220143944