Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq5 105 5e-18 >seq5 Length=63188916 Score = 105 bits (116), Expect = 5e-18 Identities = 114/150 (76%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| ||||| || ||||||||| ||||| ||||| || || | |||||| Sbjct 52112110 GCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACACCCAGGCCCATG 52112169 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 || ||| ||||||||||| ||||| || || ||||| ||| |||||| ||||| || Sbjct 52112170 TCTCCC-GACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCA 52112228 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 | | | ||||||||| ||||| || || Sbjct 52112229 AAGCGCATGGCACGGAGGTAGAGCCATGAG 52112258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340124803066851