Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 5e-18
>seq5
Length=63188916
Score = 105 bits (116), Expect = 5e-18
Identities = 114/150 (76%), Gaps = 1/150 (1%)
Strand=Plus/Plus
Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565
|| |||||||| ||||| || ||||||||| ||||| ||||| || || | ||||||
Sbjct 52112110 GCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACACCCAGGCCCATG 52112169
Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625
|| ||| ||||||||||| ||||| || || ||||| ||| |||||| ||||| ||
Sbjct 52112170 TCTCCC-GACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCA 52112228
Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655
| | | ||||||||| ||||| || ||
Sbjct 52112229 AAGCGCATGGCACGGAGGTAGAGCCATGAG 52112258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340124803066851
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |