Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq44 107 4e-18
>seq44
Length=19882732
Score = 107 bits (118), Expect = 4e-18
Identities = 160/226 (71%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 68236 CTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGA 68295
|||||| ||||| | ||| ||| || ||||||||||| ||||| || | || ||||
Sbjct 2427255 CTCCGC--AGGCGAAGCACCGTGTGCAGGGTGGACTCTTTCTGGATATTGCAGTCTGAGA 2427312
Query 68296 GTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAA 68355
| || | || || || | ||| || || || || | || | || ||||| ||||| |
Sbjct 2427313 GAGTGCCGCCGTCCTCCAGCTGTTTGCCCGCAAAAGTCAGACACTGCTGGTCAGGTGGGA 2427372
Query 68356 TGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTT 68415
|||| |||| |||||| || || || ||||| ||| || |||| | | || || |
Sbjct 2427373 TGCCCTCCTCGTCTTGGATTTTAGCTTTGACATTCTCAATAATGTCACCGGGCTCGACCT 2427432
Query 68416 CCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| ||||||||| || ||| | |||||||| || || ||||| ||
Sbjct 2427433 TGAGGGTGATGGTCTTGCCCATCAGGGTCTTCACAAAGATCTGTAT 2427478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921586836895640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |