Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq25 127 2e-24
seq14 93.3 4e-14
>seq25
Length=29395486
Score = 127 bits (140), Expect = 2e-24
Identities = 123/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
||||| ||||||||||| ||| | ||||||| ||||||||| ||||| || ||||||||
Sbjct 9574117 TCTTCTAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTA 9574176
Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408
|| || || || || ||| ||||| ||||||| || ||||| || | || | |
Sbjct 9574177 TCCTGGATCTTGGCCTCCACATTCTCCATGGTATCACTGGGTTCCACCTCCAGGGTGATG 9574236
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||||||||||||| || || ||||| |||||||||||
Sbjct 9574237 GTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 9574274
>seq14
Length=35217250
Score = 93.3 bits (102), Expect = 4e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| || || || |||||||||||||| || | | || || |
Sbjct 7097613 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCC 7097672
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
||||| || |||||||| ||| | || || | ||||| || ||||||||||||| ||
Sbjct 7097673 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAAGAGGAATTCCTTCCTT 7097732
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
| || || || |||| || || | | |||| || || || || | || |
Sbjct 7097733 ATTCTGGATCTTGGCCTTTGCACTTTCTATTATATCCGAGGGTTCAACCTCGAGAGCGAT 7097792
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| || || | |||| |||||||| ||||| ||
Sbjct 7097793 GGTCTTTCCCGTAAGGATTTTCACGAAAATCTGCATCTT 7097831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499625519956280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |