Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq48 109 9e-19
>seq48
Length=18573065
Score = 109 bits (120), Expect = 9e-19
Identities = 117/152 (77%), Gaps = 2/152 (1%)
Strand=Plus/Plus
Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969
||| || ||| || || | ||||||| || |||||||| ||| || || || || |
Sbjct 2883762 CCTGCTTCCAGCCATAGAAGTGCATGCTAGTCAGTTTGCCATAGTTAGGCTCAGCAATAT 2883821
Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028
| ||||||| |||||||||||| || || ||| ||||| | || || ||||| |||| |
Sbjct 2883822 GGATGTTCAAAGACTGGCTTTGATCAAT-AAAAGCGCCTCTCTCGGCTGCCATCTTGAGA 2883880
Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060
||||| ||||| ||||| |||||||| |||||
Sbjct 2883881 ATGGTTTTCTGAGAAATTTCCCACACAGTCTT 2883912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795124516948720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |