Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq60 82.4 6e-11
>seq60
Length=14545593
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/213 (70%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG-CGATAGTTCTGGCATC 101316
|| || | |||||| |||||||| ||| | || |||| |||| ||| | | |||
Sbjct 3695498 AACACGAGATGAAGAGTAGATTCCTTT-GAATGCTGTAGTCGGACGAAGCATGTC-CATT 3695555
Query 101317 GTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATC 101376
|||| || ||| || |||||||||| | ||| ||||| || || || | | | |||||
Sbjct 3695556 TTCCAGTTTCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGGATTCTTCCCTTATC 3695615
Query 101377 TTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGT 101436
|| | ||| |||||| ||| || || || || |||| || |||||| ||| ||
Sbjct 3695616 CTGGACTTTGCCCTTTACATTTTTTATTGTATCTGATTTTTCAACCTCAAGAATGATGGT 3695675
Query 101437 TTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | | ||||||||||| |||| |||
Sbjct 3695676 CTTTCCC-TAAGGGTTTTTACAAAAATCTTCAT 3695707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396263490892059
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |