Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq60 91.5 3e-13 >seq60 Length=14545593 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| | |||||||||||||| ||||| || ||||| || || || ||||| Sbjct 8428959 GGAGAGCGAGTTGTAGCCTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGCTCTTTTGCA 8429018 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 | || |||||||||||| | | | |||| |||||||| || |||||||| ||||| Sbjct 8429019 TCGATATTCTGGCTCAAG-AAACGAGGACTGATGCCCGGCCTCACGTTTTCCAATGAGCT 8429077 Query 25992 CATCAGCAGGGACGAGG 26008 |||||||| || |||| Sbjct 8429078 GATCAGCAGAGATGAGG 8429094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928808958201280