Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq60 82.4 9e-11 >seq60 Length=14545593 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 65443 AATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAG 65502 |||||||||||||||||||| || ||| || || |||||||| ||||||||||||||| Sbjct 8430600 AATCCATTTGACTTTATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCTTTGAGAAG 8430659 Query 65503 CGAGTTGGGGACTAT 65517 |||| || || ||| Sbjct 8430660 AGAGTAGGCGAGTAT 8430674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596546579870560