Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq14 96.9 7e-15 >seq14 Length=35217250 Score = 96.9 bits (106), Expect = 7e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||| | ||| ||| || || || || |||| Sbjct 7097601 ACCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAG 7097659 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || ||| |||| |||| ||| || ||||||||||| | ||| || |||||| | | Sbjct 7097660 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAAGAG 7097719 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| |||| || || || ||| || | ||| ||| || | ||| | Sbjct 7097720 GAATTCCTTCCTTATTCTGGATCTTGGCCTTTGCACTTTCTATTATATCCGAGGGTTCAA 7097779 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || |||| ||||| || || || | |||| | || |||||||| || Sbjct 7097780 CCTCGAGAGCGATGGTCTTTCCCGTAAGGATTTTCACGAAAATCTGCATCTT 7097831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984441061662450