Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq44 91.5 4e-13 >seq44 Length=19882732 Score = 91.5 bits (100), Expect = 4e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || || || |||||||| || || ||||| ||||||| ||||| ||||| Sbjct 10901840 ACCAGTCTCAGCAGTCTTCACAGCTGTGTCGATGAGACCCTCACGACCCCCCATGGCATG 10901899 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 ||| || | ||| || || || | | ||||| |||| || || ||||| Sbjct 10901900 GAAAAAGAACTCAGTGGGGGTGAGGCCAGCCAGGTAGGAGTTCTCCACAAAGCCACGGCT 10901959 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||| ||| || ||| |||| | ||||| ||||| |||| || | | || |||| Sbjct 10901960 CTCAGGCCCATAGTCATCCTTGATGAAGTGAGGCAGAGTCCGGTGTTTGAATCCAAATGG 10902019 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCC 302816 ||| ||||| || || ||||||||||| || Sbjct 10902020 GATCCGCTTGCCCTCCACGTTCTGCTGCCC 10902049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471759386394319