Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq4 158 1e-32
seq58 152 6e-31
seq40 149 8e-30
seq111 143 3e-28
seq149 102 1e-15
seq1626 86.0 8e-11
>seq4
Length=66015319
Score = 158 bits (174), Expect = 1e-32
Identities = 156/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| ||||| ||| | |||||||||||| ||||| | |||||| | ||
Sbjct 65321562 GCTTGGCCAGCTCGCCAGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGA 65321503
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| ||| ||||||| || ||||||| |||| |
Sbjct 65321502 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGA 65321443
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||| |||| ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 65321442 TGTCGGTGACGAACGAGTTCATGATACCCATAGCCTTGGACGAGATGCCGGTGTCGGGGT 65321383
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| | |||||||||
Sbjct 65321382 GGACCTGCTTCAACACCTTGTA 65321361
Score = 152 bits (168), Expect = 6e-31
Identities = 155/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | |||||||||||| ||||| | |||||| | ||
Sbjct 65325640 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGA 65325699
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| ||| ||||||| || ||||||| |||| |
Sbjct 65325700 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGA 65325759
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | ||| |||||||| ||| || |
Sbjct 65325760 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCCGGAT 65325819
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| | |||||| ||
Sbjct 65325820 GCACCTGCTTCAACACCTTATA 65325841
Score = 86.0 bits (94), Expect = 8e-11
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| || |||||| | |||||||| | |||| ||| || |||||| |||| |||||
Sbjct 12290928 GCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCCAAT 12290987
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295
||||||||||| || | || ||||| || ||||||||||| || |||||
Sbjct 12290988 ATGATCAAGGGGAAAACTCCTGAGGAAATTCGCAAGACCTTCAATATCAA 12291037
>seq58
Length=15455763
Score = 152 bits (168), Expect = 6e-31
Identities = 155/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 272478 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 272537
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| || ||| | ||||||| |||| |
Sbjct 272538 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCTTCGCCGGCGATGCGCTCGAAGA 272597
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 272598 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 272657
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 272658 GCACCTGCTTCAGCACCTTGTA 272679
Score = 152 bits (168), Expect = 6e-31
Identities = 155/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 282070 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 282011
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| || ||| | ||||||| |||| |
Sbjct 282010 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCTTCGCCGGCGATGCGCTCGAAGA 281951
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 281950 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 281891
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 281890 GCACCTGCTTCAGCACCTTGTA 281869
Score = 152 bits (168), Expect = 6e-31
Identities = 155/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 339415 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 339474
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| || ||| | ||||||| |||| |
Sbjct 339475 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCTTCGCCGGCGATGCGCTCGAAGA 339534
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| |||||||| ||| ||||
Sbjct 339535 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 339594
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 339595 GCACCTGCTTCAGCACCTTGTA 339616
>seq40
Length=22380538
Score = 149 bits (164), Expect = 8e-30
Identities = 154/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 246917 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 246976
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 246977 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 247036
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 247037 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 247096
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 247097 GGACCTGCTTCAGCACCTTGTA 247118
Score = 143 bits (158), Expect = 3e-28
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||
Sbjct 197551 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 197610
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 197611 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 197670
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 197671 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 197730
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 197731 GGACCTGCTTCAGCACCTTGTA 197752
Score = 143 bits (158), Expect = 3e-28
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||
Sbjct 231435 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 231376
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 231375 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 231316
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 231315 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 231256
Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546
| |||||||| |||||||| ||||
Sbjct 231255 GGACCTGCTTCAGCACCTTATAGA 231232
Score = 143 bits (158), Expect = 3e-28
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||
Sbjct 313173 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 313114
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 313113 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 313054
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 313053 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 312994
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 312993 GGACCTGCTTCAGCACCTTGTA 312972
Score = 143 bits (158), Expect = 3e-28
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||
Sbjct 386923 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 386864
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 386863 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 386804
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 386803 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 386744
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 386743 GGACCTGCTTCAGCACCTTGTA 386722
Score = 140 bits (154), Expect = 4e-27
Identities = 152/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||
Sbjct 282742 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 282801
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | ||||| || || |||||| ||||||| |||| |
Sbjct 282802 TGGTCGAGCGCTTGTTGTAATGCGCTAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 282861
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 282862 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 282921
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 282922 GGACCTGCTTCAGCACCTTGTA 282943
Score = 134 bits (148), Expect = 2e-25
Identities = 151/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||
Sbjct 179271 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 179330
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 179331 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 179390
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | ||| |||||||| ||| ||||
Sbjct 179391 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCCGGGT 179450
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 179451 GGACCTGCTTCAGCACCTTGTA 179472
Score = 96.9 bits (106), Expect = 4e-14
Identities = 147/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||
Sbjct 701570 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCTCTGGACGTGA 701511
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | ||||||| || |||||| ||||||| |||| |
Sbjct 701510 TGGTCAAGCGCTTGTTGTAACGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 701451
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTG-TTGGAGATGCCCACGTCGGGG 1254521
||||||| || || ||||| | || ||| | |||| || || || ||| |||
Sbjct 701450 TGTCGTTAACGAAAGAGTTTACGATACTCAT-GGCTTGCGAAGAAATACCAGTGTCAGGG 701392
Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548
| |||||||| | |||||||||||||
Sbjct 701391 TAGACCTGCTTCAACACCTTGTAGATG 701365
>seq111
Length=4240621
Score = 143 bits (158), Expect = 3e-28
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||
Sbjct 3529122 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 3529063
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 3529062 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 3529003
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 3529002 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 3528943
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 3528942 GGACCTGCTTCAGCACCTTGTA 3528921
Score = 143 bits (158), Expect = 3e-28
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||
Sbjct 3547125 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 3547184
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 3547185 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 3547244
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 3547245 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 3547304
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 3547305 GGACCTGCTTCAGCACCTTGTA 3547326
Score = 143 bits (158), Expect = 3e-28
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||
Sbjct 3568195 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 3568254
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 3568255 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 3568314
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| |||||||| ||||||||
Sbjct 3568315 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 3568374
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 3568375 GGACCTGCTTCAGCACCTTGTA 3568396
Score = 140 bits (154), Expect = 4e-27
Identities = 152/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||
Sbjct 3509409 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 3509468
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 3509469 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 3509528
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | ||| |||||||| ||||||||
Sbjct 3509529 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCGGGGT 3509588
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 3509589 GGACCTGCTTCAGCACCTTGTA 3509610
>seq149
Length=1557992
Score = 102 bits (112), Expect = 1e-15
Identities = 109/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||
Sbjct 108198 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 108139
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || |||||| ||||||| |||| |
Sbjct 108138 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 108079
Query 1254463 TGTCGTTGACAAACGAGTTCATGA 1254486
|||||||||| |||||||||||||
Sbjct 108078 TGTCGTTGACGAACGAGTTCATGA 108055
>seq1626
Length=1913
Score = 86.0 bits (94), Expect = 8e-11
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 1254368 CAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGC 1254427
|||||||||||||||||||||||| | | | || ||| ||||||| | ||| | |
Sbjct 235 CAGGCGCACGGCGGTCTGGATCTCTCTGGAGGACATGGTGGAGCGCTTGGTGGAGCGGAC 176
Query 1254428 CAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAC 1254487
||| || |||||||| | ||||||| |||| ||||| || || ||||| | ||||||
Sbjct 175 CAGGCGCGCGGCCTCGTCGGCGATGCGCTCGAAGATGTCCTTCACGAACGAATCCATGAC 116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106885866323579
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