Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq4 210 3e-48
seq40 208 1e-47
seq58 206 4e-47
seq111 203 5e-46
seq149 163 4e-34
seq1626 123 4e-22
seq32 118 2e-20
seq144 95.1 2e-13
>seq4
Length=66015319
Score = 210 bits (232), Expect = 3e-48
Identities = 193/244 (79%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||| ||||||||||||||||| ||||| || ||||||||| ||||||| ||||| |||
Sbjct 65321601 TGTATTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCAGGCA 65321542
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||| | |||||||| ||| || ||||||||| |
Sbjct 65321541 GCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 65321482
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| ||||||| || ||||||| |||| |||||| |||| ||||||||||
Sbjct 65321481 GCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGATGTCGGTGACGAACGAGTTCA 65321422
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||||||||| |||||||| | ||||||||
Sbjct 65321421 TGATACCCATAGCCTTGGACGAGATGCCGGTGTCGGGGTGGACCTGCTTCAACACCTTGT 65321362
Query 1485710 AAAC 1485713
| ||
Sbjct 65321361 ACAC 65321358
Score = 210 bits (232), Expect = 3e-48
Identities = 193/244 (79%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||| ||||||||||||||||||||||| || ||||||||| ||||||| |||||| |||
Sbjct 65325601 TGTATTTGGTGACGGCCTTGGTACCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 65325660
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||| | |||||||| ||| || ||||||||| |
Sbjct 65325661 GCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 65325720
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| ||||||| || ||||||| |||| ||||||||||| ||||||||||
Sbjct 65325721 GCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 65325780
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | || |||||||| ||| || ||||||||||| | |||||| |
Sbjct 65325781 TGATGCCCATGGCCTTAGACGAGATGCCGGTGTCCGGATGCACCTGCTTCAACACCTTAT 65325840
Query 1485710 AAAC 1485713
| ||
Sbjct 65325841 ACAC 65325844
>seq40
Length=22380538
Score = 208 bits (230), Expect = 1e-47
Identities = 193/245 (79%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 246878 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 246937
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| | || | ||| || |||||||||
Sbjct 246938 GCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGATGGTCGAGCGCTTGTTGTAAT 246997
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| ||||||||||| ||||||||||
Sbjct 246998 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 247057
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||||||||| |||||||| ||||||||||
Sbjct 247058 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 247117
Query 1485710 AAACA 1485714
| |||
Sbjct 247118 ACACA 247122
Score = 201 bits (222), Expect = 2e-45
Identities = 191/244 (78%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 197512 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 197571
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| | || ||| || |||||||||
Sbjct 197572 GCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGATGGTCGAGCGCTTGTTGTAAT 197631
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| ||||||||||| ||||||||||
Sbjct 197632 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 197691
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||||||||| |||||||| ||||||||||
Sbjct 197692 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 197751
Query 1485710 AAAC 1485713
| ||
Sbjct 197752 ACAC 197755
Score = 201 bits (222), Expect = 2e-45
Identities = 191/244 (78%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 313212 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 313153
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| | || ||| || |||||||||
Sbjct 313152 GCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGATGGTCGAGCGCTTGTTGTAAT 313093
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| ||||||||||| ||||||||||
Sbjct 313092 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 313033
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||||||||| |||||||| ||||||||||
Sbjct 313032 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 312973
Query 1485710 AAAC 1485713
| ||
Sbjct 312972 ACAC 312969
Score = 201 bits (222), Expect = 2e-45
Identities = 191/244 (78%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 386962 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 386903
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| | || ||| || |||||||||
Sbjct 386902 GCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGATGGTCGAGCGCTTGTTGTAAT 386843
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| ||||||||||| ||||||||||
Sbjct 386842 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 386783
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||||||||| |||||||| ||||||||||
Sbjct 386782 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 386723
Query 1485710 AAAC 1485713
| ||
Sbjct 386722 ACAC 386719
Score = 199 bits (220), Expect = 6e-45
Identities = 191/245 (78%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 231474 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 231415
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| | || ||| || |||||||||
Sbjct 231414 GCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGATGGTCGAGCGCTTGTTGTAAT 231355
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| ||||||||||| ||||||||||
Sbjct 231354 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 231295
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||||||||| |||||||| |||||||| |
Sbjct 231294 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTAT 231235
Query 1485710 AAACA 1485714
| |||
Sbjct 231234 AGACA 231230
Score = 197 bits (218), Expect = 2e-44
Identities = 190/244 (78%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 282703 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 282762
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| | || ||| || |||||||||
Sbjct 282763 GCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGATGGTCGAGCGCTTGTTGTAAT 282822
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||| ||||| |||||| ||||||| |||| ||||||||||| ||||||||||
Sbjct 282823 GCGCTAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 282882
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||||||||| |||||||| ||||||||||
Sbjct 282883 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 282942
Query 1485710 AAAC 1485713
| ||
Sbjct 282943 ACAC 282946
Score = 192 bits (212), Expect = 9e-43
Identities = 189/244 (77%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 179232 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 179291
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| | || ||| || |||||||||
Sbjct 179292 GCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGATGGTCGAGCGCTTGTTGTAAT 179351
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| ||||||||||| ||||||||||
Sbjct 179352 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 179411
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | || |||||||| ||| ||||| |||||||| ||||||||||
Sbjct 179412 TGATGCCCATGGCCTTAGACGAGATGCCGGTGTCCGGGTGGACCTGCTTCAGCACCTTGT 179471
Query 1485710 AAAC 1485713
| ||
Sbjct 179472 ACAC 179475
Score = 156 bits (172), Expect = 7e-32
Identities = 178/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531
|||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 701607 TACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCAGC 701548
Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591
| |||||||||||| ||||||||||| | || ||| || ||||||||| |||
Sbjct 701547 AGCAGGCGCACGGCCGTCTGGATCTCTCTGGACGTGATGGTCAAGCGCTTGTTGTAACGC 701488
Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651
|||||||| |||||| ||||||| |||| |||||||| || || ||||| | |
Sbjct 701487 GCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTAACGAAAGAGTTTACG 701428
Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710
|| ||| | || || || || ||| |||| |||||||| | |||||||||
Sbjct 701427 ATACTCATGGCTTGCGAAGAAATACCAGTGTCAGGGTAGACCTGCTTCAACACCTTGTA 701369
Score = 123 bits (136), Expect = 4e-22
Identities = 121/156 (78%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 243064 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 243005
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| | || ||| || |||||||||
Sbjct 243004 GCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGATGGTCGAGCGCTTGTTGTAAT 242945
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGA 1485625
|||||||||| |||||| ||||||| ||||
Sbjct 242944 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGA 242909
Score = 93.3 bits (102), Expect = 7e-13
Identities = 165/241 (68%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531
||||| ||||| ||||| || ||||| || || || ||| |||||| || || | |
Sbjct 711161 TACTTCGTGACAGCCTTAGTGCCCTCAGACACCGCATGCTTGGCCAACTCCCCTGGTAGA 711220
Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591
| ||||||||| || ||||||||||| | || || || | |||||||| | |
Sbjct 711221 AGCAGGCGCACAGCCGTCTGGATCTCTCTGGAAGTAATGGTTGAGTGCTTGTTATAGTGT 711280
Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651
|| | ||| ||||| |||| || |||| || ||| | || || || ||||||
Sbjct 711281 GCTAAGCGCGACGCCTCCCCTGCGATCCGTTCGAAGATATCGGTAACGAAAGAATTCATG 711340
Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711
|| ||| | || ||||| || |||||| || || ||||| | ||||||||||
Sbjct 711341 ATGCTCATAGCCTTTGAAGAGATACCAGTGTCGGGATGAACTTGCTTCAACACCTTGTAA 711400
Query 1485712 A 1485712
|
Sbjct 711401 A 711401
>seq58
Length=15455763
Score = 206 bits (228), Expect = 4e-47
Identities = 192/244 (79%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| |||||| |||
Sbjct 272439 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 272498
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| |||| ||| || |||||||||
Sbjct 272499 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 272558
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| || ||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 272559 GCGCCAGGCGGGACGCTTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 272618
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||| |||||||||||||| ||||||||||
Sbjct 272619 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGCACCTGCTTCAGCACCTTGT 272678
Query 1485710 AAAC 1485713
| ||
Sbjct 272679 ACAC 272682
Score = 206 bits (228), Expect = 4e-47
Identities = 192/244 (79%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| |||||| |||
Sbjct 282109 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 282050
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| |||| ||| || |||||||||
Sbjct 282049 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 281990
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| || ||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 281989 GCGCCAGGCGGGACGCTTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 281930
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||| |||||||||||||| ||||||||||
Sbjct 281929 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGCACCTGCTTCAGCACCTTGT 281870
Query 1485710 AAAC 1485713
| ||
Sbjct 281869 ACAC 281866
Score = 203 bits (224), Expect = 5e-46
Identities = 190/242 (79%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531
||||||||||| |||||||| ||||| || ||||||||| ||||||| |||||| |||
Sbjct 339378 TACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCAGC 339437
Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591
| |||||||||||| ||||||||||| |||| ||| || ||||||||| ||
Sbjct 339438 AGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAATGC 339497
Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651
||||||||| || ||| | ||||||| |||| ||||||||||| || |||||||||
Sbjct 339498 GCCAGGCGGGACGCTTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATG 339557
Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711
|| ||| | ||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct 339558 ATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGCACCTGCTTCAGCACCTTGTAC 339617
Query 1485712 AC 1485713
||
Sbjct 339618 AC 339619
Score = 122 bits (134), Expect = 1e-21
Identities = 105/130 (81%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| |||||| |||
Sbjct 289720 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 289779
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| |||| ||| || |||||||||
Sbjct 289780 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 289839
Query 1485590 GCGCCAGGCG 1485599
||||||||||
Sbjct 289840 GCGCCAGGCG 289849
>seq111
Length=4240621
Score = 203 bits (224), Expect = 5e-46
Identities = 192/245 (78%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 3568156 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 3568215
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| | || ||| || |||||||||
Sbjct 3568216 GCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGATGGTCGAGCGCTTGTTGTAAT 3568275
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| ||||||||||| ||||||||||
Sbjct 3568276 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 3568335
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||||||||| |||||||| ||||||||||
Sbjct 3568336 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 3568395
Query 1485710 AAACA 1485714
| |||
Sbjct 3568396 ACACA 3568400
Score = 201 bits (222), Expect = 2e-45
Identities = 191/244 (78%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 3529161 TGTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 3529102
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| | || ||| || |||||||||
Sbjct 3529101 GCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGATGGTCGAGCGCTTGTTGTAAT 3529042
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| ||||||||||| ||||||||||
Sbjct 3529041 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 3528982
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||||||||| |||||||| ||||||||||
Sbjct 3528981 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 3528922
Query 1485710 AAAC 1485713
| ||
Sbjct 3528921 ACAC 3528918
Score = 201 bits (222), Expect = 2e-45
Identities = 191/244 (78%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 3547086 TGTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 3547145
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| | || ||| || |||||||||
Sbjct 3547146 GCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGATGGTCGAGCGCTTGTTGTAAT 3547205
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| ||||||||||| ||||||||||
Sbjct 3547206 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 3547265
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||||||||| |||||||| ||||||||||
Sbjct 3547266 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 3547325
Query 1485710 AAAC 1485713
| ||
Sbjct 3547326 ACAC 3547329
Score = 197 bits (218), Expect = 2e-44
Identities = 190/244 (78%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 3509370 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 3509429
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| | || ||| || |||||||||
Sbjct 3509430 GCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGATGGTCGAGCGCTTGTTGTAAT 3509489
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| ||||||||||| ||||||||||
Sbjct 3509490 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 3509549
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | || |||||||| ||||||||| |||||||| ||||||||||
Sbjct 3509550 TGATGCCCATGGCCTTAGACGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 3509609
Query 1485710 AAAC 1485713
| ||
Sbjct 3509610 ACAC 3509613
Score = 104 bits (114), Expect = 4e-16
Identities = 74/85 (87%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 3575117 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 3575058
Query 1485530 TGATCAGGCGCACGGCGGTCTGGAT 1485554
| |||||||||||| ||||||||
Sbjct 3575057 GCAGCAGGCGCACGGCCGTCTGGAT 3575033
>seq149
Length=1557992
Score = 163 bits (180), Expect = 4e-34
Identities = 152/193 (79%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 1485461 TGGCATCGTTGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTT 1485520
||||| | |||||||||||||||||||||| ||||| || ||||||||| ||||||| |
Sbjct 108246 TGGCACTGGTGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCT 108187
Query 1485521 CGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCT 1485580
| ||| ||| | |||||||||||| ||||||||||| | || ||| || |||||
Sbjct 108186 CCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGATGGTCGAGCGCT 108127
Query 1485581 TGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAA 1485640
|||| |||||||||| |||||| ||||||| |||| ||||||||||| |
Sbjct 108126 TGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGA 108067
Query 1485641 ACGAGTTCATGAT 1485653
|||||||||||||
Sbjct 108066 ACGAGTTCATGAT 108054
Score = 109 bits (120), Expect = 9e-18
Identities = 77/88 (88%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 121032 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 120973
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTC 1485557
| |||||||||||| |||||||||||
Sbjct 120972 GCAGCAGGCGCACGGCCGTCTGGATCTC 120945
>seq1626
Length=1913
Score = 123 bits (136), Expect = 4e-22
Identities = 137/183 (75%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||| | ||||||||||||| |||| || || |||||| || | | || || |||
Sbjct 299 TGTACCTAATGACGGCCTTGGTGGCCTCAGACACCGCGTGCTTGCCAATCTCCCCCGGCA 240
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||||||||||||||| | || | || ||| ||||||| | | ||
Sbjct 239 GCAGCAGGCGCACGGCGGTCTGGATCTCTCTGGAGGACATGGTGGAGCGCTTGGTGGAGC 180
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| ||||||| |||||||| | ||||||| |||| ||||| || || ||||| | ||
Sbjct 179 GGACCAGGCGCGCGGCCTCGTCGGCGATGCGCTCGAAGATGTCCTTCACGAACGAATCCA 120
Query 1485650 TGA 1485652
|||
Sbjct 119 TGA 117
>seq32
Length=24824463
Score = 118 bits (130), Expect = 2e-20
Identities = 165/228 (72%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || || |||
Sbjct 6741667 TGTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCCAGCTCCCCAGGCA 6741608
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGG-TGCCGATCGTGTTGCGCTTGTTAGTG 1485588
| ||| ||||| || ||||||| || |||| || | | ||| || | |||
Sbjct 6741607 GCAGCAGACGCACAGCCGTCTGGACTTCCCGGGATGTCAGTGTGGTTCGGCCCG--AGTA 6741550
Query 1485589 C-GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
| | ||||| ||| | ||||| | | | || || | || || || ||||| |||||
Sbjct 6741549 CTGGGCCAGCCGGGCAGCCTCACCGGCCAGCCGCTCAAACACATCATTCACAAATGAGTT 6741490
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1485695
|||||| ||| | ||| |||||||| | ||| |||||||||||
Sbjct 6741489 CATGATACTCATGGCCTTGGAAGAGATGCCGATGTCTGGGTGCACCTG 6741442
>seq144
Length=1829894
Score = 95.1 bits (104), Expect = 2e-13
Identities = 133/184 (72%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGT-TCGCCGCGCA 1485529
||| ||| || ||||||||| ||||| | ||||||||| || ||||| || || |||
Sbjct 1797410 GTATTTGACGAGGGCCTTGGTGCCCTCGGGTACGGCGTGCTTG-CCAGTCTCCCCTGGCA 1797352
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| |||||||||||||| | | | ||| ||| ||||||| | |
Sbjct 1797351 CCAGCAGGCGCACAGCGGTCTGGATCTCTCTGCAGGAGATGGTGGAGCGCTTGGTGAAGA 1797292
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||||| | | ||||| |||||| |||| ||||| || || ||||| | ||
Sbjct 1797291 GAGCCAGGAGTGCAGCCTCATCAGCGATGCACTCGAAGATGTCCTTTACGAACGAATCCA 1797232
Query 1485650 TGAT 1485653
||||
Sbjct 1797231 TGAT 1797228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915918021730193
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |