Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq14 100 2e-16
>seq14
Length=35217250
Score = 100 bits (110), Expect = 2e-16
Identities = 155/218 (71%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || ||||||||||| || || | | || || |||
Sbjct 7097616 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 7097675
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||||||| | |||| |||||||||||| | ||||| || || || |
Sbjct 7097676 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAAGAGGAATTCCTTCCTTATT 7097735
Query 29694 TTGTAATTTTTG--TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || || | |||| || |||||| | || || |||| || || |||| ||
Sbjct 7097736 CTG-GATCTTGGCCTTTG-CACTTTCTATTATATCCGAGGGTTCAACCTCGAGAGCGATG 7097793
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || || | | |||| || || |||||||| ||
Sbjct 7097794 GTCTTTCCCGTAAGGATTTTCACGAAAATCTGCATCTT 7097831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385204706970267
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |