Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq60 98.7 9e-16
>seq60
Length=14545593
Score = 98.7 bits (108), Expect = 9e-16
Identities = 129/176 (73%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181
|| ||||| |||||||| | || |||||| | || |||||||| |||| ||| | ||
Sbjct 8692958 TCCAGCATATGGGGGCCGACGTGTGATGGCCTCGACCGCATTGTTGAGCGCTGTAACTTG 8692899
Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241
|| ||| | || |||||||| ||| | | |||||||||||||| ||||||| || |
Sbjct 8692898 CCCGAGATGCATGTGGGCGATTGGATGCTCTTTGAAAACATGGGTGCTTACA-CTGTTGC 8692840
Query 21242 AGCT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCAG 21296
||| |||| || || ||||| |||| | |||| | ||||||| || ||||
Sbjct 8692839 TGCTGCTTCTACTTTCAACGGGTTCCAGAGGCCAACTATCTACTATGTGATGTCAG 8692784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 463527712934160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |