Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq25 109 5e-19
seq44 104 2e-17
>seq25
Length=29395486
Score = 109 bits (120), Expect = 5e-19
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| || ||||||||||| || | ||||||| ||||||||| |||||||||||||| ||
Sbjct 9574117 TCTTCTAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTA 9574176
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| || | | ||| | || || |||| ||||| || | ||||| |
Sbjct 9574177 TCCTGGATCTTGGCCTCCACATTCTCCATGGTATCACTGGGTTCCACCTCCAGGGTGATG 9574236
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||||||||| || || ||||| || |||||
Sbjct 9574237 GTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 9574271
>seq44
Length=19882732
Score = 104 bits (114), Expect = 2e-17
Identities = 144/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||||||||| |||||| | || | ||| |||||| ||||| |||||
Sbjct 2427281 GGTGGACTCTTTCTGGATATTGCAGTCTGAGAGAGTGCCGCCGTCCTCCAGCTGTTTGCC 2427340
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581
||| || | || | ||||||||| || |||||||| |||| ||| ||| ||| || |
Sbjct 2427341 CGCAAAAGTCAGACACTGCTGGTCAGGTGGGATGCCCTCCTCGTCTTGGAT-TTTAGCTT 2427399
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||||| |||| |||||| || | || ||||| ||| ||||| |||| |
Sbjct 2427400 TGACATTCTCAATAATGTCACCGGGCTCGACCTTGAGGGTGATGGTCTTGCCCATCAGGG 2427459
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || ||||| ||
Sbjct 2427460 TCTTCACAAAGATCTGTAT 2427478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483402145999880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |