Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq14 107 5e-18
>seq14
Length=35217250
Score = 107 bits (118), Expect = 5e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|||| || || ||||| || ||| || | || || ||| || || | | | |||
Sbjct 7097813 AAAATCCTTACGGGAAAGACCATCGCTCTCGAGGTTGAACCCTCGGATATAATAGAAAGT 7097754
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
| |||| ||||| || | || ||||||||| | || |||||||| |||||
Sbjct 7097753 GCAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCTTGATCAGCAAAGACTGATCTTT 7097694
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | |||||| | || |||||| | || || |||||
Sbjct 7097693 GCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAAAAGGAGTCC 7097634
Query 206365 ACTCTTCACCTTGTTTTGAGACTT 206388
|||||||| ||||| |||||||||
Sbjct 7097633 ACTCTTCATCTTGTGTTGAGACTT 7097610
Score = 96.9 bits (106), Expect = 8e-15
Identities = 83/103 (81%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 204754 AAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCT 204813
||||||||| ||||| |||||||| ||||| || || | || ||||||| |||||| |
Sbjct 7097610 AAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACG 7097669
Query 204814 TCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|||||||||||| ||||| || || ||||| || | ||| |||
Sbjct 7097670 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGA 7097712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181774056402127
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |