Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq58 170 3e-36
seq40 170 3e-36
seq4 170 3e-36
seq111 167 3e-35
seq149 143 4e-28
seq1626 113 6e-19
seq144 96.9 5e-14
>seq58
Length=15455763
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||||||||| |||| |||| || |||| |||||
Sbjct 272679 TACAAGGTGCTGAAGCAGGTGCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 272626
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | ||| || |||
Sbjct 272625 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAAGCGTCCCGC 272566
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 272565 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 272506
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| ||||||||| |||||||||||||
Sbjct 272505 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 272457
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||||||||| |||| |||| || |||| |||||
Sbjct 281869 TACAAGGTGCTGAAGCAGGTGCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 281922
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | ||| || |||
Sbjct 281923 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAAGCGTCCCGC 281982
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 281983 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 282042
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| ||||||||| |||||||||||||
Sbjct 282043 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 282091
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||||||||| |||| |||| || |||| |||||
Sbjct 339616 TACAAGGTGCTGAAGCAGGTGCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 339563
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | ||| || |||
Sbjct 339562 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAAGCGTCCCGC 339503
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 339502 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 339443
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| ||||||||| |||||||||||||
Sbjct 339442 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 339394
Score = 107 bits (118), Expect = 3e-17
Identities = 91/112 (81%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| | |||||||||| || ||| | || ||||||||||| ||||||
Sbjct 289849 CGCCTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTG 289790
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||| | ||| |||||| ||||||| ||||||||| |||||||||||||
Sbjct 289789 CGCCTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 289738
>seq40
Length=22380538
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 247118 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 247065
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 247064 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 247005
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 247004 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 246945
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 246944 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 246896
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 197752 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 197699
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 197698 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 197639
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| |||||||||
Sbjct 197638 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 197579
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 197578 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 197530
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 312972 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 313025
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 313026 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 313085
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| |||||||||
Sbjct 313086 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 313145
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 313146 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 313194
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 386722 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 386775
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 386776 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 386835
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| |||||||||
Sbjct 386836 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 386895
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 386896 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 386944
Score = 165 bits (182), Expect = 1e-34
Identities = 176/231 (76%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971
|||| |||||||| |||||||| |||||| |||| |||| || |||| |||
Sbjct 231232 TCTATAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCA 231285
Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031
|| |||||||||||||| ||||||||||| |||| ||||||| |||||| |
Sbjct 231286 TGGGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGC 231345
Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091
||||||||| | |||||||||| || ||| | | ||||||||||| |||||||
Sbjct 231346 GCCTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGC 231405
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 231406 GCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 231456
Score = 161 bits (178), Expect = 1e-33
Identities = 174/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 282943 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 282890
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 282889 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 282830
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
|| |||| | |||||||||| || ||| | | ||||||||||| |||||||||
Sbjct 282829 CTAGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 282770
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 282769 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 282721
Score = 158 bits (174), Expect = 2e-32
Identities = 173/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| ||||| |||| |||| || ||| |||||
Sbjct 179472 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCTAAGGCCATG 179419
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 179418 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 179359
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| |||||||||
Sbjct 179358 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 179299
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 179298 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 179250
Score = 136 bits (150), Expect = 6e-26
Identities = 171/232 (74%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||| | |||||||| |||| || ||| || || |||| ||
Sbjct 701366 ATCTACAAGGTGTTGAAGCAGGTCTACCCTGACAC---TGGTATTTCTTCG--CAAG-CC 701419
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| ||| | ||||| || || |||||||| |||| ||||||| ||||||
Sbjct 701420 ATGAGTATCGTAAACTCTTTCGTTAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCG 701479
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
||||||||||| | |||||||||| || ||| | | ||||||||||| ||||||
Sbjct 701480 CGCCTGGCGCGTTACAACAAGCGCTTGACCATCACGTCCAGAGAGATCCAGACGGCCGTG 701539
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 701540 CGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 701591
Score = 105 bits (116), Expect = 1e-16
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 725005 TCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCG 725064
|||| ||||||| |||||| |||||||||| | |||||||||| || |||
Sbjct 242909 TCGAGCGCATCGCGGGCGAGGCGTCGCGCCTGGCGCATTACAACAAGCGCTCGACCATCA 242968
Query 725065 GCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACG 725124
| | ||||||||||| |||||||||||| | ||| ||| || ||||||| |||||
Sbjct 242969 CGTCCAGGGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACG 243028
Query 725125 CCGTCTCCGAGGGCACCA 725142
|||| |||||||||||||
Sbjct 243029 CCGTGTCCGAGGGCACCA 243046
>seq4
Length=66015319
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||| | |||||||| |||||| |||| |||| || |||| | |||
Sbjct 65321361 TACAAGGTGTTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCTATG 65321414
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| |||| |||||| |||| ||||||| || ||||||| |||
Sbjct 65321415 GGTATCATGAACTCGTTCGTCACCGACATCTTCGAGCGCATCGCCAGCGAGGCCTCCCGC 65321474
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | |||||| | ||||| |||||||||
Sbjct 65321475 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGCGAGGTGCAGACGGCCGTGCGC 65321534
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||||| ||||||| ||||||||| |||||||||||||
Sbjct 65321535 CTGCTGCTGCCTGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 65321583
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|| |||||| | ||||||||||| || |||| |||| || ||| |||||
Sbjct 65325841 TATAAGGTGTTGAAGCAGGTGCATCCGGACACCGG-----CATC-TCGTCTAAGGCCATG 65325788
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| || ||||||| |||
Sbjct 65325787 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCAGCGAGGCCTCCCGC 65325728
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | |||||| | ||||| |||||||||
Sbjct 65325727 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGCGAGGTGCAGACGGCCGTGCGC 65325668
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| ||||||||| |||||||| ||||
Sbjct 65325667 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGTACCA 65325619
>seq111
Length=4240621
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 3568396 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 3568343
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 3568342 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 3568283
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| |||||||||
Sbjct 3568282 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 3568223
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 3568222 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 3568174
Score = 161 bits (178), Expect = 1e-33
Identities = 174/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || ||| |||||
Sbjct 3509610 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCTAAGGCCATG 3509557
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 3509556 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 3509497
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| |||||||||
Sbjct 3509496 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 3509437
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 3509436 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 3509388
Score = 161 bits (178), Expect = 1e-33
Identities = 174/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 3528921 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 3528974
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 3528975 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 3529034
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| |||||||||
Sbjct 3529035 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 3529094
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 3529095 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 3529143
Score = 161 bits (178), Expect = 1e-33
Identities = 174/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 3547326 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 3547273
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 3547272 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 3547213
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | ||||||||||| |||||||||
Sbjct 3547212 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 3547153
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 3547152 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 3547104
>seq149
Length=1557992
Score = 143 bits (158), Expect = 4e-28
Identities = 136/174 (78%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 724969 CCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG 725028
||||| |||||||||||||| ||||||||||| |||| ||||||| ||||||
Sbjct 108046 CCATGGGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGT 108105
Query 725029 GTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088
|||||||||| | |||||||||| || ||| | | ||||||||||| ||||
Sbjct 108106 CGCGCCTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCG 108165
Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 108166 TGCGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 108219
Score = 86.0 bits (94), Expect = 9e-11
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 725073 GAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCC 725132
||||||||||| |||||||||||| | ||| ||| || ||||||| ||||||||| |||
Sbjct 120945 GAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCC 121004
Query 725133 GAGGGCACCA 725142
||||||||||
Sbjct 121005 GAGGGCACCA 121014
>seq1626
Length=1913
Score = 113 bits (124), Expect = 6e-19
Identities = 124/165 (75%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 724978 TCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGG 725037
||||| | ||||| || || ||||| |||| ||||||| | |||||||| |||||||
Sbjct 117 TCATGGATTCGTTCGTGAAGGACATCTTCGAGCGCATCGCCGACGAGGCCGCGCGCCTGG 176
Query 725038 CGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGA 725097
||||||| ||||||| ||| || | | | ||||||||||||||||||||||||
Sbjct 177 TCCGCTCCACCAAGCGCTCCACCATGTCCTCCAGAGAGATCCAGACCGCCGTGCGCCTGC 236
Query 725098 TCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| ||| || || | | || |||||| || || |||| |||||
Sbjct 237 TGCTGCCGGGGGAGATTGGCAAGCACGCGGTGTCTGAGGCCACCA 281
>seq144
Length=1829894
Score = 96.9 bits (106), Expect = 5e-14
Identities = 123/167 (74%), Gaps = 2/167 (1%)
Strand=Plus/Plus
Query 724977 ATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTG 725036
|||||| | ||||| || || ||||| |||| |||||| ||||| | | ||||
Sbjct 1797228 ATCATGGATTCGTTCGTAAAGGACATCTTCGAGTGCATCGCTGATGAGGCTGCACTCCTG 1797287
Query 725037 GCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTG 725096
|| | || || ||||||| ||| ||| | | |||||||||||||| |||||||||
Sbjct 1797288 GCTCTCTTCACCAAGCGCTCCACCATCTCCTGCAGAGAGATCCAGACCGCTGTGCGCCTG 1797347
Query 725097 ATCATGCGCGGCGA-ACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| ||| || || ||||| || ||||||||| ||||||||||||
Sbjct 1797348 CTGGTGCCAGGGGAGACTGG-CAAGCACGCCGTACCCGAGGGCACCA 1797393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177513453176094
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |