Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq14 93.3 4e-14
>seq14
Length=35217250
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/224 (71%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || ||||| |||||||||||||||||||| | ||| || |
Sbjct 7097611 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTACG 7097669
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTT- 134613
|| || || || ||||| ||||| |||| | |||||||| | || || ||||
Sbjct 7097670 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAAGAGGAATTCCTTC 7097729
Query 134614 CTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAG 134673
||| |||| || || |||| | || | | | || || | ||| || |||||||
Sbjct 7097730 CTTATTCTGGATCTTGGCCTTTG-CACTTTCTATTATATCCGAGGGTTCAACCTCGAGAG 7097788
Query 134674 TAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || | |||| |||||||| ||||| |||
Sbjct 7097789 CGATGGTCTTTCCCGTAAGGATTTTCACGAAAATCTGCATCTTG 7097832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505378897939240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |