Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq13 279 2e-69 seq22 235 2e-56 seq14 187 8e-42 seq115 138 3e-27 seq60 127 6e-24 seq25 109 2e-18 seq11 100 9e-16 seq55 98.7 3e-15 seq72 93.3 1e-13 >seq13 Length=35552856 Score = 279 bits (308), Expect = 2e-69 Identities = 887/1360 (65%), Gaps = 19/1360 (1%) Strand=Plus/Plus Query 349304 TACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCT 349363 ||||| || || || || |||||||| ||||||| ||| | || || || || | || Sbjct 33279109 TACGTGGCCTTCACAGACACTGAGCGGCTGATTGGGGATGCGGCCAAGAACCAGGTAGCC 33279168 Query 349364 GCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC 349423 ||||| | || || || |||||||| || || || || || || | ||| ||| Sbjct 33279169 ATGAATCCCCAGAACACTGTCTTTGATGCCAAACGTCTGATCGGCAGGAAATTTAATGAT 33279228 Query 349424 AAATCTACA-CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGA 349482 | || ||||| ||| | |||| || |||||| || | || || || | Sbjct 33279229 CC-TGTAGTGCAATCAGATATGAAACTTTGGCCTTTTCAAGTAATC---AACGAAGGAGG 33279284 Query 349483 TAAACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAA 349541 || || | | ||| |||||||| || ||||| ||| ||||| || |||| Sbjct 33279285 CAAGCCCAAGGTAATGGTGTCCTATAAAGGGGAGAAAAAAGC-TTTCTACCCTGAGGAAA 33279343 Query 349542 TTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAG 349601 |||| || ||||| | ||| |||||||| | |||||| || | ||| || | | | Sbjct 33279344 TTTCTTCCATGGTACTGACTAAGATGAAGGAGACTGCTGAGGCTTTTTTGGGCCACCCTG 33279403 Query 349602 TAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAA 349661 | || ||||||| || ||||| ||||| ||||| ||||| | || || || || | Sbjct 33279404 TCACCAATGCTGTGATCACTGTGCCAGCTTATTTCAATGACTCTCAACGCCAGGCCACCA 33279463 Query 349662 AAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTG 349721 | ||||| || |||||||| | |||||||||||||| || |||||||| || |||| Sbjct 33279464 AGGATGCAGGTGTGATTGCGGGTCTCAATGTTCTAAGAATTATCAATGAACCGACAGCTG 33279523 Query 349722 CAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTG 349781 | || ||||| ||||| | |||||| || | ||| | | || |||| || |||| Sbjct 33279524 CTGCTATTGCCTATGGCTTAGATAAAGCAGGTCAGGGAGAGAGACATGTTCTGATCTTTG 33279583 Query 349782 ATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAG 349841 || | ||||| || || |||||||| || | || || | || || || |||||||| | Sbjct 33279584 ATCTGGGTGGAGGCACATTTGATGTGTCCGTCCTGACCATAGATGATGGGATTTTTGAGG 33279643 Query 349842 TTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTT 349901 | || || || || || || || || || || || ||||| ||||| || | || || Sbjct 33279644 TGAAGGCCACAGCCGGGGACACCCACCTGGGGGGGGAAGACTTTGACAACAGGCTTGTGA 33279703 Query 349902 CGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGA 349960 || ||||| | || || ||| | |||| || | || || | | || | Sbjct 33279704 GCCACTTTGTGGAGGAGTTCAAGAG-GAAGCACAAGAAGGACATCAGCCAGAACAAGCGG 33279762 Query 349961 GCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACC 350020 || || | || || | || || || || | || ||| | || | || || | ||| Sbjct 33279763 GCTGTGAGGCGGCTGCGCACCGCCTGCGAGAGGGCCAAGAGGACCCTGTCGTCCAGCACC 33279822 Query 350021 CAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACA 350080 || || | ||||||||||| ||| ||| |||| || |||| |||| || || Sbjct 33279823 CAGGCCAACTTGGAAATTGATTCACTTTATGAAGGCATCGACTTCTACACATCCATCACC 33279882 Query 350081 CGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTA-GAGCAACAATGGATCCTGTGGA 350139 | || ||||||||||| || ||| || || |||| |||| || |||| |||||||| Sbjct 33279883 AGAGCCCGGTTTGAAGAGTTGTGTGCAGACCTGTTTAGGAGC-ACCCTGGAGCCTGTGGA 33279941 Query 350140 AAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGG 350199 || | | ||||| || ||| || | | || |||| || |||||||| || Sbjct 33279942 GAAGGCTCTTCGGGATGCCAAGATGGATAAGGCTAAAATCCATGACGTTGTTTTAGTAGG 33280001 Query 350200 TGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGA 350259 || || || || || || |||||||| | | || || | ||||| ||| || Sbjct 33280002 GGGCTCCACCCGCATCCCTAAAGTTCAGAGGCTGCTGCAAGACTACTTTAACGGCCGTGA 33280061 Query 350260 AC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCAT 350318 | | | ||| | || || || ||||| || || || ||||| ||||| || |||||| Sbjct 33280062 TCTCAACAAGAGC-ATCAACCCCGATGAGGCGGTGGCCTATGGGGCTGCAGTACAGGCAG 33280120 Query 350319 CTATTTTATCTGGAAATAAGAGTTCTAAAA---TTGATGATCTATTACTACTAGATGTAA 350375 | ||||| || | ||| ||| ||| | | || || | | || ||||| Sbjct 33280121 CCATTTTGATGGGGGACAAG---TCTGAAAAGGTACAGGACCTGCTTTTGCTGGATGTGG 33280177 Query 350376 CTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAA 350435 |||| || || || || || || || | || | || ||||||||||| || | | Sbjct 33280178 CTCCCCTATCCCTAGGGTTGGAGACGGCAGGAGGTGTGATGACTGTTCTGATCAAGCGCA 33280237 Query 350436 ATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAG 350495 | ||| | || || || || | || | || | || | ||||||| ||||||| Sbjct 33280238 ACTCTACCATCCCCACCAAGCAGACACAGATCTTCACCACCTACTCAGATAACCAGCCAG 33280297 Query 350496 CGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTG 350555 |||| || || || | || || || | || || || || || || | Sbjct 33280298 GGGTATTGATCCAGGTGTACGAGGGCGAGAGGGCCATGACGCGGGACAACAACCTGCTGG 33280357 Query 350556 GAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCT 350615 | ||| ||| |||| ||| || || ||||| ||||||||||||||||| || Sbjct 33280358 GGCGCTTTGACCTGAGTGGAATCCCTCCTGCACCTAGGGGAGTTCCTCAGATTGAGGTGA 33280417 Query 350616 CTTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGC 350655 | || || || ||| | ||||||||| | ||||| || || Sbjct 33280418 CCTTTGACATCGATGCCAATGGTATTCTCAATGTGACAGC 33280457 >seq22 Length=30314786 Score = 235 bits (260), Expect = 2e-56 Identities = 386/549 (70%), Gaps = 8/549 (1%) Strand=Plus/Plus Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819 |||| ||| | || || ||||| ||||| ||||| ||||||||||| ||| | || || Sbjct 1355823 GAAAGAAACGTGCTGATCTTTGACTTAGGAGGTGGCACTTTTGATGTGTCAATTCTCACT 1355882 Query 349820 CTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAA 349879 ||||||| ||||| || || |||||| | || ||||| || || || | ||||||||| Sbjct 1355883 ATTGAAGATGGAATCTTCGAGGTTAAATCTACAGCTGGAGACACCCACTTGGGTGGAGAA 1355942 Query 349880 GATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAAT 349938 || |||||||| || | || |||||| || ||| || ||||| ||||| ||| | Sbjct 1355943 GACTTTGATAACCGGATGGTCAACCATTTTATTGCAGAGTTCAAGCG-CAAGCATAAGAA 1356001 Query 349939 TGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAA 349998 || || | || || || || | |||||||| | ||||| |||||||||||||| Sbjct 1356002 GGACATCAGTGAGAACAAGAGGGCTGTCCGTCGCCTGCGCACTGCTTGTGAACGTGCTAA 1356061 Query 349999 GCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAA 350058 |||| | | || || | ||||| || |||||| |||||||| || ||| || | Sbjct 1356062 GCGTACTCTTTCTTCCAGCACCCAGGCCAGTATTGAGATTGATTCACTCTATGAAGGAAT 1356121 Query 350059 AGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTT 350116 || |||| | | |||||||| ||||| || |||||||||| || ||| || || || Sbjct 1356122 CGACTTCTATACCTCTATTACCCGTGCCCGATTTGAAGAAT--TGAATGCTGACCTATTC 1356179 Query 350117 AGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAG 350176 | | || |||| ||||| || |||| | ||||| || | ||| ||| Sbjct 1356180 CGTGGCACCCTGGACCCTGTAGAGAAAGCTCTTCGGGATGCCAAGCTAGACAAGTCCCAG 1356239 Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 || |||| | || | || ||||||||||| ||||| || || |||| || | ||| Sbjct 1356240 ATCCATGATATTGTCCTGGTGGGTGGTTCTACCCGTATCCCCAAGATTCAGAAGCTTCTA 1356299 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCT-AGATCAATTAATCCAGATGAAGCTGTTGC 350295 || ||||| || || ||||||| | ||| | || || || ||||| |||||||| Sbjct 1356300 CAGGATTTTTTCAACGGAAAAGAACTGAATAAGAGC-ATCAACCCTGATGAGGCTGTTGC 1356358 Query 350296 ATATGGTGC 350304 |||||||| Sbjct 1356359 TTATGGTGC 1356367 Score = 102 bits (112), Expect = 2e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||||||| | || ||||| || || |||||||| | |||||| || || ||||||| Sbjct 1355581 ATGCTGTTGTCACAGTACCTGCGTACTTTAATGACTCTCAGCGTCAGGCTACCAAAGATG 1355640 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 |||| | ||||| || | ||||| || ||||| || ||||| || |||||||| || | Sbjct 1355641 CTGGAACTATTGCTGGTCTCAATGTGCTTAGAATCATCAATGAGCCAACTGCTGCTGCTA 1355700 Query 349728 TTGCATATGGGCTTGATAAAA 349748 |||| ||||| | || |||| Sbjct 1355701 TTGCTTATGGCTTAGACAAAA 1355721 Score = 84.2 bits (92), Expect = 7e-11 Identities = 129/184 (70%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || || ||| | || || || || |||||||| | ||||| || | | || ||| Sbjct 1354546 GGCATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTTTTCCAGCACGGAAAAGTGGAA 1354605 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 ||||| || ||||||||||| ||| |||| || ||| || || || ||||| || || Sbjct 1354606 ATAATAGCCAATGATCAAGGAAACCGAACCACCCCAAGCTATGTCGCCTTTACTGACACC 1354665 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 || || |||| ||||| ||||||| || |||| ||| || || | || || ||| Sbjct 1354666 GAACGATTGATCGGTGACGCTGCAAAGAACCAAGTTGCAATGAACCCCACCAACACAGTT 1354725 Query 349385 TTTG 349388 |||| Sbjct 1354726 TTTG 1354729 >seq14 Length=35217250 Score = 187 bits (206), Expect = 8e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 |||||||| | ||| | |||||||||||||| ||||| |||||||| || || ||||| Sbjct 7097601 ACCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 7097660 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 || || || |||||||| ||||| || ||||||||||| || | |||||||||| |||| Sbjct 7097661 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAAGAGG 7097720 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||||||||| |||| ||| || || || ||| || | || || ||| || |||||||| Sbjct 7097721 AATTCCTTCCTTATTCTGGATCTTGGCCTTTGCACTTTCTATTATATCCGAGGGTTCAAC 7097780 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | | |||||||| || || |||| || ||||||||||| Sbjct 7097781 CTCGAGAGCGATGGTCTTTCCCGTAAGGATTTTCACGAAAATCTGCAT 7097828 >seq115 Length=4025681 Score = 138 bits (152), Expect = 3e-27 Identities = 139/180 (77%), Gaps = 3/180 (2%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 |||||| | | ||| | |||||||||||||| | || |||||||| | | ||||| Sbjct 2519627 ACCACCTGGAAGTCTCAACACAAGATGAAGAGTGTATTCCTTTTGAATGT---AGTCAGA 2519683 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 || || | ||| |||| |||||||| ||||||||||| || | ||||||||||||||| Sbjct 2519684 CAAAGTACATCCAGCTTCCAGTTGTTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 2519743 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||||||||| |||||||| || | ||| ||||||| || | | ||| | |||||||| Sbjct 2519744 AATTCCTTCCTTATCCTGGATCTCAGCCTTTACATATTCTGTTGTATCCAAGGGTTCAAC 2519803 >seq60 Length=14545593 Score = 127 bits (140), Expect = 6e-24 Identities = 166/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 ||| ||| | ||| | || |||||||||||||| || ||| |||| | || || || Sbjct 3695483 CCATCACAAAGTCTCAACACGAGATGAAGAGTAGATTCCTTT-GAATGCTGTAGTCGGAC 3695541 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | | | |||| ||| |||| || |||||||| || || | |||||||||||||| Sbjct 3695542 GAAGCATGTCCATTTTCCAGTTTCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGG 3695601 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 |||| | | |||||||| | ||| | |||||||| | || | ||| ||| |||||| Sbjct 3695602 ATTCTTCCCTTATCCTGGACTTTGCCCTTTACATTTTTTATTGTATCTGATTTTTCAACC 3695661 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| | | |||||||| | || |||||||||||||||| ||| Sbjct 3695662 TCAAGAATGATGGTCTTTCC-CTAAGGGTTTTTACAAAAATCTTCAT 3695707 >seq25 Length=29395486 Score = 109 bits (120), Expect = 2e-18 Identities = 132/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 140559 TTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGC 140618 || || ||||| | || | |||||||| || || || || |||||||| || | ||| Sbjct 9574093 TTGTAGTCAGAAAGAGTGAGGCCATCTTCTAGCTGCTTGCCTGCAAAGATGAGCCTCTGC 9574152 Query 140619 TGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCA 140678 || |||||||| || |||||||||||||| || || || | ||||| || || | |||| Sbjct 9574153 TGGTCAGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTCCACATTCTCCATGGTATCA 9574212 Query 140679 GATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| || || || || | ||||| ||||| || || || || || || |||||| Sbjct 9574213 CTGGGTTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATT 9574272 >seq11 Length=39176111 Score = 100 bits (110), Expect = 9e-16 Identities = 142/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309 |||| || ||||| |||||||| || ||||| ||||||||||| || ||| ||| | Sbjct 28111451 CAGCCTGGACAGCAGCACCATACGCTACAGCCTCATCTGGGTTTATGCCACGGGATGGCT 28111510 Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369 | |||||||| || || ||| || || ||| ||||| ||||| |||| || || |||| Sbjct 28111511 CCTTGCCATTGAAGAACTCTTTAACCAGTTGCTGAATCTTTGGGATTCGGGTAGAGCCAC 28111570 Query 183370 CGACTAATACTACTTCATCGATAT--TACTTTTACTAATTTGTGAATCTTTTAAAACTTT 183427 | || | || | |||||| |||| |||| | | || | ||||||| || || || Sbjct 28111571 CAACAAGAACAATTTCATCAATATCAGACTTCTTCAAA--TCAGAATCTTCTAGCACCTT 28111628 Query 183428 TTCAACAGGGTCCATAGT 183445 | ||||| | ||| || Sbjct 28111629 CTGGACAGGCTTCATGGT 28111646 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||| ||| ||||||||||||||||||| ||||||||||| || ||||| ||||||| Sbjct 28112386 ATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACCAAAGATG 28112327 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACC 349713 |||| | || || || || |||||| | || || || ||||| || Sbjct 28112326 CTGGAACTATCGCTGGATTGAATGTTATGAGGATCATCAATGAGCC 28112281 Score = 91.5 bits (100), Expect = 4e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 ||||||||| | ||| | |||||||| ||||| || || ||||| |||| || | | Sbjct 28111592 ATTGATGAAATTGTTCTTGTTGGTGGCTCTACCCGAATCCCAAAGATTCAGCAACTGGTT 28111533 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 ||||| || |||||||| || || || | || || |||||||| ||||| || Sbjct 28111532 AAAGAGTTCTTCAATGGCAAGGAGCCATCCCGTGGCATAAACCCAGATGAGGCTGTAGCG 28111473 Query 350297 TATGGTGCTGCTGTTCAGGC 350316 |||||||||||||| ||||| Sbjct 28111472 TATGGTGCTGCTGTCCAGGC 28111453 >seq55 Length=16538760 Score = 98.7 bits (108), Expect = 3e-15 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 |||||||| || || |||||||| || || |||||||| ||||| || ||||||||||| Sbjct 16505929 TTTTGAATGTTGTAGTCAGATAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATC 16505988 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCT 140636 | | |||||||||||||||||||||| Sbjct 16505989 AATCTTTGCTGATCAGGAGGAATTCCT 16506015 >seq72 Length=11851330 Score = 93.3 bits (102), Expect = 1e-13 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 140531 AAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAG 140590 |||||||||||| ||| | ||| |||| | | ||||| | || | ||||| || || Sbjct 5386371 AAGATGAAGAGTGGACGCCTTT-GAATGCTGTGGTCAGACATAGTACCTCCATCCTCCAG 5386313 Query 140591 TTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAAT 140650 || || |||||||| || | ||||||||||||| |||||||||| | | |||| || Sbjct 5386312 CTGCTTGTTGGCAAAGATCAGTCTTTGCTGATCAGGACGAATTCCTTCCTCAACCTGGAT 5386253 Query 140651 TTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAG 140695 || || ||||| || || || | || || |||||||| || || Sbjct 5386252 CTTGGCCTTTACCTTTTCCATTGTAT-TGAGGGTTCAACCTCGAG 5386209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515194468373861