Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq13 279 2e-69
seq22 235 2e-56
seq14 187 8e-42
seq115 138 3e-27
seq60 127 6e-24
seq25 109 2e-18
seq11 100 9e-16
seq55 98.7 3e-15
seq72 93.3 1e-13
>seq13
Length=35552856
Score = 279 bits (308), Expect = 2e-69
Identities = 887/1360 (65%), Gaps = 19/1360 (1%)
Strand=Plus/Plus
Query 349304 TACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCT 349363
||||| || || || || |||||||| ||||||| ||| | || || || || | ||
Sbjct 33279109 TACGTGGCCTTCACAGACACTGAGCGGCTGATTGGGGATGCGGCCAAGAACCAGGTAGCC 33279168
Query 349364 GCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC 349423
||||| | || || || |||||||| || || || || || || | ||| |||
Sbjct 33279169 ATGAATCCCCAGAACACTGTCTTTGATGCCAAACGTCTGATCGGCAGGAAATTTAATGAT 33279228
Query 349424 AAATCTACA-CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGA 349482
| || ||||| ||| | |||| || |||||| || | || || || |
Sbjct 33279229 CC-TGTAGTGCAATCAGATATGAAACTTTGGCCTTTTCAAGTAATC---AACGAAGGAGG 33279284
Query 349483 TAAACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAA 349541
|| || | | ||| |||||||| || ||||| ||| ||||| || ||||
Sbjct 33279285 CAAGCCCAAGGTAATGGTGTCCTATAAAGGGGAGAAAAAAGC-TTTCTACCCTGAGGAAA 33279343
Query 349542 TTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAG 349601
|||| || ||||| | ||| |||||||| | |||||| || | ||| || | | |
Sbjct 33279344 TTTCTTCCATGGTACTGACTAAGATGAAGGAGACTGCTGAGGCTTTTTTGGGCCACCCTG 33279403
Query 349602 TAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAA 349661
| || ||||||| || ||||| ||||| ||||| ||||| | || || || || |
Sbjct 33279404 TCACCAATGCTGTGATCACTGTGCCAGCTTATTTCAATGACTCTCAACGCCAGGCCACCA 33279463
Query 349662 AAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTG 349721
| ||||| || |||||||| | |||||||||||||| || |||||||| || ||||
Sbjct 33279464 AGGATGCAGGTGTGATTGCGGGTCTCAATGTTCTAAGAATTATCAATGAACCGACAGCTG 33279523
Query 349722 CAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTG 349781
| || ||||| ||||| | |||||| || | ||| | | || |||| || ||||
Sbjct 33279524 CTGCTATTGCCTATGGCTTAGATAAAGCAGGTCAGGGAGAGAGACATGTTCTGATCTTTG 33279583
Query 349782 ATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAG 349841
|| | ||||| || || |||||||| || | || || | || || || |||||||| |
Sbjct 33279584 ATCTGGGTGGAGGCACATTTGATGTGTCCGTCCTGACCATAGATGATGGGATTTTTGAGG 33279643
Query 349842 TTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTT 349901
| || || || || || || || || || || || ||||| ||||| || | || ||
Sbjct 33279644 TGAAGGCCACAGCCGGGGACACCCACCTGGGGGGGGAAGACTTTGACAACAGGCTTGTGA 33279703
Query 349902 CGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGA 349960
|| ||||| | || || ||| | |||| || | || || | | || |
Sbjct 33279704 GCCACTTTGTGGAGGAGTTCAAGAG-GAAGCACAAGAAGGACATCAGCCAGAACAAGCGG 33279762
Query 349961 GCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACC 350020
|| || | || || | || || || || | || ||| | || | || || | |||
Sbjct 33279763 GCTGTGAGGCGGCTGCGCACCGCCTGCGAGAGGGCCAAGAGGACCCTGTCGTCCAGCACC 33279822
Query 350021 CAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACA 350080
|| || | ||||||||||| ||| ||| |||| || |||| |||| || ||
Sbjct 33279823 CAGGCCAACTTGGAAATTGATTCACTTTATGAAGGCATCGACTTCTACACATCCATCACC 33279882
Query 350081 CGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTA-GAGCAACAATGGATCCTGTGGA 350139
| || ||||||||||| || ||| || || |||| |||| || |||| ||||||||
Sbjct 33279883 AGAGCCCGGTTTGAAGAGTTGTGTGCAGACCTGTTTAGGAGC-ACCCTGGAGCCTGTGGA 33279941
Query 350140 AAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGG 350199
|| | | ||||| || ||| || | | || |||| || |||||||| ||
Sbjct 33279942 GAAGGCTCTTCGGGATGCCAAGATGGATAAGGCTAAAATCCATGACGTTGTTTTAGTAGG 33280001
Query 350200 TGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGA 350259
|| || || || || || |||||||| | | || || | ||||| ||| ||
Sbjct 33280002 GGGCTCCACCCGCATCCCTAAAGTTCAGAGGCTGCTGCAAGACTACTTTAACGGCCGTGA 33280061
Query 350260 AC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCAT 350318
| | | ||| | || || || ||||| || || || ||||| ||||| || ||||||
Sbjct 33280062 TCTCAACAAGAGC-ATCAACCCCGATGAGGCGGTGGCCTATGGGGCTGCAGTACAGGCAG 33280120
Query 350319 CTATTTTATCTGGAAATAAGAGTTCTAAAA---TTGATGATCTATTACTACTAGATGTAA 350375
| ||||| || | ||| ||| ||| | | || || | | || |||||
Sbjct 33280121 CCATTTTGATGGGGGACAAG---TCTGAAAAGGTACAGGACCTGCTTTTGCTGGATGTGG 33280177
Query 350376 CTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAA 350435
|||| || || || || || || || | || | || ||||||||||| || | |
Sbjct 33280178 CTCCCCTATCCCTAGGGTTGGAGACGGCAGGAGGTGTGATGACTGTTCTGATCAAGCGCA 33280237
Query 350436 ATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAG 350495
| ||| | || || || || | || | || | || | ||||||| |||||||
Sbjct 33280238 ACTCTACCATCCCCACCAAGCAGACACAGATCTTCACCACCTACTCAGATAACCAGCCAG 33280297
Query 350496 CGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTG 350555
|||| || || || | || || || | || || || || || || |
Sbjct 33280298 GGGTATTGATCCAGGTGTACGAGGGCGAGAGGGCCATGACGCGGGACAACAACCTGCTGG 33280357
Query 350556 GAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCT 350615
| ||| ||| |||| ||| || || ||||| ||||||||||||||||| ||
Sbjct 33280358 GGCGCTTTGACCTGAGTGGAATCCCTCCTGCACCTAGGGGAGTTCCTCAGATTGAGGTGA 33280417
Query 350616 CTTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGC 350655
| || || || ||| | ||||||||| | ||||| || ||
Sbjct 33280418 CCTTTGACATCGATGCCAATGGTATTCTCAATGTGACAGC 33280457
>seq22
Length=30314786
Score = 235 bits (260), Expect = 2e-56
Identities = 386/549 (70%), Gaps = 8/549 (1%)
Strand=Plus/Plus
Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819
|||| ||| | || || ||||| ||||| ||||| ||||||||||| ||| | || ||
Sbjct 1355823 GAAAGAAACGTGCTGATCTTTGACTTAGGAGGTGGCACTTTTGATGTGTCAATTCTCACT 1355882
Query 349820 CTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAA 349879
||||||| ||||| || || |||||| | || ||||| || || || | |||||||||
Sbjct 1355883 ATTGAAGATGGAATCTTCGAGGTTAAATCTACAGCTGGAGACACCCACTTGGGTGGAGAA 1355942
Query 349880 GATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAAT 349938
|| |||||||| || | || |||||| || ||| || ||||| ||||| ||| |
Sbjct 1355943 GACTTTGATAACCGGATGGTCAACCATTTTATTGCAGAGTTCAAGCG-CAAGCATAAGAA 1356001
Query 349939 TGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAA 349998
|| || | || || || || | |||||||| | ||||| ||||||||||||||
Sbjct 1356002 GGACATCAGTGAGAACAAGAGGGCTGTCCGTCGCCTGCGCACTGCTTGTGAACGTGCTAA 1356061
Query 349999 GCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAA 350058
|||| | | || || | ||||| || |||||| |||||||| || ||| || |
Sbjct 1356062 GCGTACTCTTTCTTCCAGCACCCAGGCCAGTATTGAGATTGATTCACTCTATGAAGGAAT 1356121
Query 350059 AGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTT 350116
|| |||| | | |||||||| ||||| || |||||||||| || ||| || || ||
Sbjct 1356122 CGACTTCTATACCTCTATTACCCGTGCCCGATTTGAAGAAT--TGAATGCTGACCTATTC 1356179
Query 350117 AGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAG 350176
| | || |||| ||||| || |||| | ||||| || | ||| |||
Sbjct 1356180 CGTGGCACCCTGGACCCTGTAGAGAAAGCTCTTCGGGATGCCAAGCTAGACAAGTCCCAG 1356239
Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236
|| |||| | || | || ||||||||||| ||||| || || |||| || | |||
Sbjct 1356240 ATCCATGATATTGTCCTGGTGGGTGGTTCTACCCGTATCCCCAAGATTCAGAAGCTTCTA 1356299
Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCT-AGATCAATTAATCCAGATGAAGCTGTTGC 350295
|| ||||| || || ||||||| | ||| | || || || ||||| ||||||||
Sbjct 1356300 CAGGATTTTTTCAACGGAAAAGAACTGAATAAGAGC-ATCAACCCTGATGAGGCTGTTGC 1356358
Query 350296 ATATGGTGC 350304
||||||||
Sbjct 1356359 TTATGGTGC 1356367
Score = 102 bits (112), Expect = 2e-16
Identities = 107/141 (76%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667
|||||||| | || ||||| || || |||||||| | |||||| || || |||||||
Sbjct 1355581 ATGCTGTTGTCACAGTACCTGCGTACTTTAATGACTCTCAGCGTCAGGCTACCAAAGATG 1355640
Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727
|||| | ||||| || | ||||| || ||||| || ||||| || |||||||| || |
Sbjct 1355641 CTGGAACTATTGCTGGTCTCAATGTGCTTAGAATCATCAATGAGCCAACTGCTGCTGCTA 1355700
Query 349728 TTGCATATGGGCTTGATAAAA 349748
|||| ||||| | || ||||
Sbjct 1355701 TTGCTTATGGCTTAGACAAAA 1355721
Score = 84.2 bits (92), Expect = 7e-11
Identities = 129/184 (70%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264
|| || ||| | || || || || |||||||| | ||||| || | | || |||
Sbjct 1354546 GGCATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTTTTCCAGCACGGAAAAGTGGAA 1354605
Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324
||||| || ||||||||||| ||| |||| || ||| || || || ||||| || ||
Sbjct 1354606 ATAATAGCCAATGATCAAGGAAACCGAACCACCCCAAGCTATGTCGCCTTTACTGACACC 1354665
Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384
|| || |||| ||||| ||||||| || |||| ||| || || | || || |||
Sbjct 1354666 GAACGATTGATCGGTGACGCTGCAAAGAACCAAGTTGCAATGAACCCCACCAACACAGTT 1354725
Query 349385 TTTG 349388
||||
Sbjct 1354726 TTTG 1354729
>seq14
Length=35217250
Score = 187 bits (206), Expect = 8e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
|||||||| | ||| | |||||||||||||| ||||| |||||||| || || |||||
Sbjct 7097601 ACCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 7097660
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
|| || || |||||||| ||||| || ||||||||||| || | |||||||||| ||||
Sbjct 7097661 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAAGAGG 7097720
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
||||||||| |||| ||| || || || ||| || | || || ||| || ||||||||
Sbjct 7097721 AATTCCTTCCTTATTCTGGATCTTGGCCTTTGCACTTTCTATTATATCCGAGGGTTCAAC 7097780
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || | | |||||||| || || |||| || |||||||||||
Sbjct 7097781 CTCGAGAGCGATGGTCTTTCCCGTAAGGATTTTCACGAAAATCTGCAT 7097828
>seq115
Length=4025681
Score = 138 bits (152), Expect = 3e-27
Identities = 139/180 (77%), Gaps = 3/180 (2%)
Strand=Plus/Plus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
|||||| | | ||| | |||||||||||||| | || |||||||| | | |||||
Sbjct 2519627 ACCACCTGGAAGTCTCAACACAAGATGAAGAGTGTATTCCTTTTGAATGT---AGTCAGA 2519683
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
|| || | ||| |||| |||||||| ||||||||||| || | |||||||||||||||
Sbjct 2519684 CAAAGTACATCCAGCTTCCAGTTGTTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 2519743
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
||||||||| |||||||| || | ||| ||||||| || | | ||| | ||||||||
Sbjct 2519744 AATTCCTTCCTTATCCTGGATCTCAGCCTTTACATATTCTGTTGTATCCAAGGGTTCAAC 2519803
>seq60
Length=14545593
Score = 127 bits (140), Expect = 6e-24
Identities = 166/227 (73%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
||| ||| | ||| | || |||||||||||||| || ||| |||| | || || ||
Sbjct 3695483 CCATCACAAAGTCTCAACACGAGATGAAGAGTAGATTCCTTT-GAATGCTGTAGTCGGAC 3695541
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| | | |||| ||| |||| || |||||||| || || | ||||||||||||||
Sbjct 3695542 GAAGCATGTCCATTTTCCAGTTTCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGG 3695601
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690
|||| | | |||||||| | ||| | |||||||| | || | ||| ||| ||||||
Sbjct 3695602 ATTCTTCCCTTATCCTGGACTTTGCCCTTTACATTTTTTATTGTATCTGATTTTTCAACC 3695661
Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| | | |||||||| | || |||||||||||||||| |||
Sbjct 3695662 TCAAGAATGATGGTCTTTCC-CTAAGGGTTTTTACAAAAATCTTCAT 3695707
>seq25
Length=29395486
Score = 109 bits (120), Expect = 2e-18
Identities = 132/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 140559 TTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGC 140618
|| || ||||| | || | |||||||| || || || || |||||||| || | |||
Sbjct 9574093 TTGTAGTCAGAAAGAGTGAGGCCATCTTCTAGCTGCTTGCCTGCAAAGATGAGCCTCTGC 9574152
Query 140619 TGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCA 140678
|| |||||||| || |||||||||||||| || || || | ||||| || || | ||||
Sbjct 9574153 TGGTCAGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTCCACATTCTCCATGGTATCA 9574212
Query 140679 GATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
||||| || || || || | ||||| ||||| || || || || || || ||||||
Sbjct 9574213 CTGGGTTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATT 9574272
>seq11
Length=39176111
Score = 100 bits (110), Expect = 9e-16
Identities = 142/198 (72%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309
|||| || ||||| |||||||| || ||||| ||||||||||| || ||| ||| |
Sbjct 28111451 CAGCCTGGACAGCAGCACCATACGCTACAGCCTCATCTGGGTTTATGCCACGGGATGGCT 28111510
Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369
| |||||||| || || ||| || || ||| ||||| ||||| |||| || || ||||
Sbjct 28111511 CCTTGCCATTGAAGAACTCTTTAACCAGTTGCTGAATCTTTGGGATTCGGGTAGAGCCAC 28111570
Query 183370 CGACTAATACTACTTCATCGATAT--TACTTTTACTAATTTGTGAATCTTTTAAAACTTT 183427
| || | || | |||||| |||| |||| | | || | ||||||| || || ||
Sbjct 28111571 CAACAAGAACAATTTCATCAATATCAGACTTCTTCAAA--TCAGAATCTTCTAGCACCTT 28111628
Query 183428 TTCAACAGGGTCCATAGT 183445
| ||||| | ||| ||
Sbjct 28111629 CTGGACAGGCTTCATGGT 28111646
Score = 93.3 bits (102), Expect = 1e-13
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667
|||| ||| ||||||||||||||||||| ||||||||||| || ||||| |||||||
Sbjct 28112386 ATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACCAAAGATG 28112327
Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACC 349713
|||| | || || || || |||||| | || || || ||||| ||
Sbjct 28112326 CTGGAACTATCGCTGGATTGAATGTTATGAGGATCATCAATGAGCC 28112281
Score = 91.5 bits (100), Expect = 4e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236
||||||||| | ||| | |||||||| ||||| || || ||||| |||| || | |
Sbjct 28111592 ATTGATGAAATTGTTCTTGTTGGTGGCTCTACCCGAATCCCAAAGATTCAGCAACTGGTT 28111533
Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296
||||| || |||||||| || || || | || || |||||||| ||||| ||
Sbjct 28111532 AAAGAGTTCTTCAATGGCAAGGAGCCATCCCGTGGCATAAACCCAGATGAGGCTGTAGCG 28111473
Query 350297 TATGGTGCTGCTGTTCAGGC 350316
|||||||||||||| |||||
Sbjct 28111472 TATGGTGCTGCTGTCCAGGC 28111453
>seq55
Length=16538760
Score = 98.7 bits (108), Expect = 3e-15
Identities = 74/87 (85%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
|||||||| || || |||||||| || || |||||||| ||||| || |||||||||||
Sbjct 16505929 TTTTGAATGTTGTAGTCAGATAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATC 16505988
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCT 140636
| | ||||||||||||||||||||||
Sbjct 16505989 AATCTTTGCTGATCAGGAGGAATTCCT 16506015
>seq72
Length=11851330
Score = 93.3 bits (102), Expect = 1e-13
Identities = 121/165 (73%), Gaps = 2/165 (1%)
Strand=Plus/Minus
Query 140531 AAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAG 140590
|||||||||||| ||| | ||| |||| | | ||||| | || | ||||| || ||
Sbjct 5386371 AAGATGAAGAGTGGACGCCTTT-GAATGCTGTGGTCAGACATAGTACCTCCATCCTCCAG 5386313
Query 140591 TTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAAT 140650
|| || |||||||| || | ||||||||||||| |||||||||| | | |||| ||
Sbjct 5386312 CTGCTTGTTGGCAAAGATCAGTCTTTGCTGATCAGGACGAATTCCTTCCTCAACCTGGAT 5386253
Query 140651 TTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAG 140695
|| || ||||| || || || | || || |||||||| || ||
Sbjct 5386252 CTTGGCCTTTACCTTTTCCATTGTAT-TGAGGGTTCAACCTCGAG 5386209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515194468373861
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