Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq82 98.7 1e-15 >seq82 Length=9772303 Score = 98.7 bits (108), Expect = 1e-15 Identities = 183/269 (68%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 22664 TTCAAATATAAGTTGTGCTACTCTATCGCCCTTATTTACGTAAAATACATCCTTACTAAA 22723 |||| | || || |||| | || | |||||| || || | |||| || || ||||| Sbjct 7100349 TTCACAAATGAGCCGTGCAATTCGACTGCCCTTTTTGACTTTAAATTTTTCTTTGCTAAA 7100290 Query 22724 ATTAAATAACAATATACCTATATTTCCCCTGTAATCTCTATCTATCACACCCGCGCCTAC 22783 |||||| | | | ||| | |||||| || |||||| |||||| ||||| || ||||| Sbjct 7100289 ATTAAACAGTATAACACCAACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTAC 7100230 Query 22784 ATCGATAAAATGATTACATGCCAATCCCGATCTAGGAGATATTCTTCCATATAATCCTTC 22843 ||| || || || || ||||| || || |||| |||||||||||| || | Sbjct 7100229 ATCTATGAAGTGTTTTGCAGCCAAGCCAGAATGTGGAGCTATTCTTCCATAAAACTCAGA 7100170 Query 22844 CGGTATATCTATTATAATATCAGTCATTACTAATTGTTTACCCATAGGTTCTATTACGTA 22903 || ||| |||| ||| || || | || | | | |||||||| || | || Sbjct 7100169 AGGAATAGCTATCTGAATGTCGGTTTTCACAAGGGCTGTCTCCATAGGTGGTACTGTATA 7100110 Query 22904 ATTATACGCGCTATATAGATCATATCCTG 22932 || |||||| || || || ||||| |||| Sbjct 7100109 ATCATACGCACTGTACAGGTCATAGCCTG 7100081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603157524760880