Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq82 127 3e-24
>seq82
Length=9772303
Score = 127 bits (140), Expect = 3e-24
Identities = 245/357 (69%), Gaps = 6/357 (2%)
Strand=Plus/Minus
Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTC 13742
||||||| |||||||| || || || || || ||| | || ||||| || || ||| |
Sbjct 5824502 GAAGAGGCGGAGTTTCCAATAGCGTATTCTATAGTGGTTCATCACAAAATTGAAATGCTT 5824443
Query 13743 GAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCC 13802
|| | ||||||||||||||||| || ||||| |||||||| | |||||||||
Sbjct 5824442 GATAGGCTCCTGAGGGCCATCTATATGCCTCAGAATTTCTACTGCATTCACGTGGACAAA 5824383
Query 13803 AAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTG 13862
|| || | || || | || || | ||| ||| || ||| ||||||
Sbjct 5824382 AAATCAGAGGATTCCTTTTTGGCGGCGGTGATTGGCATTGCCTCCTGTTTCAGTAACGTC 5824323
Query 13863 GCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGAC 13922
||||| | |||| | |||||||||| || |||||||| || ||||| |||
Sbjct 5824322 TTTGTGGCCAGTCAGCTGGAGAGTGTGGTGTACGCATCATGGAGTCGGGTTCAGGCTGAC 5824263
Query 13923 CTCAGCTGCATGTCGGACCTGGAC-GCCTCCCCCGT-CA-AGTGGAGGTACCTGCTCAAC 13979
|||| ||||||| |||||| || || | || || | |||| |||| || ||||
Sbjct 5824262 CTCAACTGCATGCAGGACCTCTACAGCAT---GAGTGCAGACTGGAAGTACTTGATCAAT 5824206
Query 13980 CTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAG 14036
|| ||||| ||||| || || | || ||||||||||| || || || ||| |||
Sbjct 5824205 CTTTGCGGTATGGATTTTCCCATTAAAACCAACCTGGAAATTGTCAGGAAGCTCAAG 5824149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658713780901120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |