Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq14 129 1e-24
>seq14
Length=35217250
Score = 129 bits (142), Expect = 1e-24
Identities = 161/217 (74%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||||| || || ||||| || ||| | |||||||| ||| ||| ||
Sbjct 7097825 CAGATTTTCGTGAAAATCCTTACGGGAAAGACCATCGCTCTCGAGGTTGAACCCTCGGAT 7097766
Query 177984 ACCATCGAGAACGT-CAAA-CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
| || |||| || |||| ||||| ||| | || |||||||| |||| || ||||
Sbjct 7097765 ATAAT--AGAAAGTGCAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCTTGATCAGC 7097708
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
|| |||| ||||| || || || || || ||||||||| | ||| | | || || |||
Sbjct 7097707 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 7097648
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
| ||||| || || || || |||||||| ||||||||
Sbjct 7097647 TTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 7097611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203683589797878
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |