Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq14 129 1e-24 >seq14 Length=35217250 Score = 129 bits (142), Expect = 1e-24 Identities = 161/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||||| || || ||||| || ||| | |||||||| ||| ||| || Sbjct 7097825 CAGATTTTCGTGAAAATCCTTACGGGAAAGACCATCGCTCTCGAGGTTGAACCCTCGGAT 7097766 Query 177984 ACCATCGAGAACGT-CAAA-CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | || |||| || |||| ||||| ||| | || |||||||| |||| || |||| Sbjct 7097765 ATAAT--AGAAAGTGCAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCTTGATCAGC 7097708 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 || |||| ||||| || || || || || ||||||||| | ||| | | || || ||| Sbjct 7097707 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 7097648 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 | ||||| || || || || |||||||| |||||||| Sbjct 7097647 TTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 7097611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203683589797878