Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017 -06-19] 11,479 sequences; 3,438,623,608 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq503 87.8 1e-12 >seq503 Length=25129 Score = 87.8 bits (96), Expect = 1e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 97120 ACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGT 97179 ||||| || |||||| | || | | || || ||||| ||||| || || |||||| Sbjct 16477 ACATGAGCAATCATATACGTCAGCAATGAGTATGATGCAATATTAAATGGTACTCCTAGT 16536 Query 97180 CCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAAC 97239 ||||||||| ||||||||| | | | ||| || | ||| ||||||| ||||||||| Sbjct 16537 CCCATATCACATGATCTTTGGTGCATCATACATGACAACTTCCCATCACCAACATAAAAC 16596 Query 97240 TGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTA 97285 || ||| | ||| || || || | |||||||| | | ||||| Sbjct 16597 TGGAACAACAAATGGCATGGTGGAAGTGCCATTTTAGCCAAATCTA 16642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346735484810030