Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017
-06-19] 11,479 sequences; 3,438,623,608 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq24 93.3 3e-14
>seq24
Length=78163535
Score = 93.3 bits (102), Expect = 3e-14
Identities = 151/216 (70%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 33157 CAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC 33216
|||||| | ||| | || ||||| ||||| || ||||| ||||||||| | | ||
Sbjct 22107635 CAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCATC 22107694
Query 33217 ATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC 33276
|||| |||||| ||| ||| || | | ||||||||| | || || ||||| || ||
Sbjct 22107695 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATC 22107754
Query 33277 GCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTAT 33333
||| |||| |||| ||| || || || ||||| || || ||||| ||
Sbjct 22107755 CTGGATCTTGGCCT---TTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGAT 22107811
Query 33334 CGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || ||||| || || || ||||||||||||||
Sbjct 22107812 GGTCTTCCCCGTCAGGGTCTTCACGAAAATTTGCAT 22107847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318733002914142
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |