Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017
-06-19] 11,479 sequences; 3,438,623,608 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq21 82.4 7e-11
>seq21
Length=107358006
Score = 82.4 bits (90), Expect = 7e-11
Identities = 105/142 (74%), Gaps = 2/142 (1%)
Strand=Plus/Minus
Query 12801 TTTAAAAATCAATATCTAGAGAAAATACATCATC-GTCCTTATTTGACATAACAGACATT 12859
|||||||||| ||||| | || |||| ||| || || | || |||||| | |
Sbjct 81533767 TTTAAAAATCTGCATCTAAGGTGAAGACATTATCTGTAGTT-TCTGCCATAACTGCAAAA 81533709
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || ||||| ||| ||||| || |||||||| || ||||| ||||| |||
Sbjct 81533708 CGCTGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCCTCTAAGGAAATGTTT 81533649
Query 12920 TCCATAAAATCGAAAGGATTTT 12941
||||||||||| || |||||||
Sbjct 81533648 TCCATAAAATCAAAGGGATTTT 81533627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430922105427558
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |