Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017
-06-19] 11,479 sequences; 3,438,623,608 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq14 109 5e-19
>seq14
Length=103589943
Score = 109 bits (120), Expect = 5e-19
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230
|| |||||||| |||| || ||||| ||||| ||||| || ||||| |||||||||||
Sbjct 5428415 GGTTGCCAAGCCTTGTCGGAAATGATCCAGTTTTACCTGGAGGAGGTGATGCCACAGGCT 5428356
Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290
|| || || || || || || || || ||||| || || ||||| || |||||||||||
Sbjct 5428355 GAGAACCATGGGCCTGAGATCAAGGAGCACGTGAACTCGCTGGGGGAGAAGCTGAAGACC 5428296
Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313
| | || |||||| | |||||
Sbjct 5428295 CTCCGGCTGCGACTGAGGCGCTG 5428273
Score = 100 bits (110), Expect = 2e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230
|| |||||||| ||||||| ||||| ||||| ||||| || ||||| |||||||||||
Sbjct 5433330 GGTTGCCAAGCCTTGTCTGAAATGATCCAGTTTTACCTGGAGGAGGTGATGCCACAGGCT 5433389
Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290
|| || || || || || || || || || || || || ||||| || ||||| |||||
Sbjct 5433390 GAGAACCATGGGCCTGAGATCAAGGAGCATGTTAACTCGCTGGGGGAGAAGCTAAAGACC 5433449
Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313
| | || |||||| | | |||
Sbjct 5433450 CTCCGGCTGCGACTGAGGCACTG 5433472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429994235255048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |