Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017 -06-19] 11,479 sequences; 3,438,623,608 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq13 122 8e-23 >seq13 Length=89791019 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || |||||||| || |||||||| || || ||||| ||| || Sbjct 87684755 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCCTC 87684696 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 |||||||| || ||| |||||| |||||||| || || || |||||||||||||| Sbjct 87684695 CAGCTGTTTGCCCGCGAAGATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 87684636 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 |||||| |||| | || | |||||| | |||||| || | ||| | || || Sbjct 87684635 GATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTT 87684576 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| ||||| || || ||||| |||||||| Sbjct 87684575 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 87684546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475432571578960