Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017 -06-19] 11,479 sequences; 3,438,623,608 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq6 172 4e-37 seq7 170 1e-36 seq1731 158 9e-33 seq491 152 4e-31 seq6841 125 5e-23 seq5 104 2e-16 >seq6 Length=73112236 Score = 172 bits (190), Expect = 4e-37 Identities = 899/1417 (63%), Gaps = 52/1417 (4%) Strand=Plus/Minus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 ||||| | |||| ||||| ||||| ||||||||||| | |||||| ||||||||||| Sbjct 40257437 TTATCCACAGCAGAGACATTGAGAATGCCATTGGCATCAATATCAAAAGTGACTTCAATC 40257378 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTA-TT 517368 ||||| || || | | ||||| || || ||| | | | | || |||| | || Sbjct 40257377 TGAGGAACACCACGTGGGGCAGGAGGTATGCCTGTGAGTTCACAC-TTGCCAGGCAAGTT 40257319 Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTAACTACAGTTTGAT 517427 ||||| || || | |||| ||||| | ||| | || |||| | ||| || | Sbjct 40257318 GTTATCCTTGGTCATGGTTCGCTCACCTACATAAACCTCAATGAGTA-CACCAGGCTGCT 40257260 Query 517428 TATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCA 517486 | || || || || || || | |||| | | || |||||| || | || | Sbjct 40257259 TGTCAGAGTAGGTGGTGAA-AGTCTGCGTCTGCTTTGTAGGAATGGTGGCATTGTGCTTG 40257201 Query 517487 ATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCA 517546 | | | ||||| | |||||| || ||||| | ||||| | ||||||||||||||| Sbjct 40257200 AGGACA---GTCATGACACCACCGGCAGTTTCAATTCCAAGGGGAAGAGGAGTGACATCC 40257144 Query 517547 ACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTGAAT 517605 | || | | | ||||| |||||| | | ||| || | ||| ||| | || | Sbjct 40257143 AACAGCAGCAAGTCTTGAACATTTTCAGATTTGTCTCCAGACGA-AATGGCTACCTGGAC 40257085 Query 517606 AGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATT 517665 ||| |||||| |||||| ||| ||| | || || | | | ||||| || ||| ||||| Sbjct 40257084 AGCTGCACCACATGCAAGAGCCTCACCGGGGTTGATGCTCTTATTTAATTCTTTCCCATT 40257025 Query 517666 GAAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATA 517724 ||| || | | ||||||| ||| | ||| || || || | ||| || ||||| || | Sbjct 40257024 GAAGAAGTCTTGGAGAAGTT-TCTCAATCTTGGGGATGCGGGTTGAGCCACCAACCAAGA 40256966 Query 517725 CAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTT 517784 |||| || || | ||| || || ||||| || | |||| | |||| || | || | Sbjct 40256965 CAATATCGTGGATCTGGGACTTGTCCAGCTTAGCATCCCGAAGGGCTTTCTCCATAGGGT 40256906 Query 517785 CAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGA 517844 | || | | |||||||| | | | |||||| || | | ||| Sbjct 40256905 CCAGGGTGCCACGGAACAAGTCAGCATTCAATTCTTCAAA--------TCGGAAG----- 40256859 Query 517845 CATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 517904 | |||||||| | | ||||||| ||||| | | || || |||| Sbjct 40256858 --------TTGATTCCTTCATAGACGGAATCAATCTCAATATTGGCCTGGGTGCTGGAAG 40256807 Query 517905 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTC-GTAAG---GCTTTTGCT 517960 | || | | |||||| | ||| | | || || | | | || ||| | || Sbjct 40256806 AGAGAGTGTGCTTAGCAAGCTCAGAAGTAGTATAGAGGCAACAGACAGCCCTCTTGTTCT 40256747 Query 517961 GATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAA 518018 |||| |||| | || | ||| |||||||| ||||||| | ||| | || Sbjct 40256746 CCCTGAT----ATCTTTCTTGTGTTTGCTCTTGAACTCTTCAATGAA--ATGGTTGACCT 40256693 Query 518019 GACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGA 518078 | ||| | | ||||| || || ||||| ||| | ||| | | || | | Sbjct 40256692 TGCCATTGGCGACGTCTTCTCCAGACA----AGTATCTCCAGCTATAGATTTGACCTCAA 40256637 Query 518079 AAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAA 518138 | | |||||| |||| || | | | ||||| | |||||||||| |||||| | Sbjct 40256636 AGATTCCATCCTCAATAGTGAGGACTGACGCATCA-AAATGCCACCACCCAAATCAAAGA 40256578 Query 518139 TAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAG 518198 | || ||||| | ||| | ||||| || | ||||| ||| |||| |||||| Sbjct 40256577 TCAGCACATTTCTCTCTGCTCCAACCTTTTTGTCTAAGCCATAGGCAGTAGCAACAGCAG 40256518 Query 518199 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 518258 |||||||| | || ||||| | ||| | || ||||||| |||| |||||||| || | Sbjct 40256517 TTGGTTCACTGATGATTCTAAGTACACTGAG-GCAGCAATGGTTCCAGCATCTTTGGTAG 40256459 Query 518259 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTT 518318 | || | || | || ||||| || ||||| || | | ||| |||| || || | Sbjct 40256458 CCTGACGCTGACAGTCATTAAAGTAAGCAGGTACTATGACAACAGCATTGGTAACAGTCT 40256399 Query 518319 TACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 518378 | |||| | || ||| ||| ||||| || | | | ||| ||||| | | | Sbjct 40256398 TCCCAAGGCAGGCTTCTGCGATTTCCTTCATCTTGGTCAGGACCATGGATGACACCTCCT 40256339 Query 518379 CTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAA 518438 |||| || | ||| | || | ||| ||||| || | || | | || Sbjct 40256338 CTGGATAAAAACTCTTTGTCTCTCCCTTGTATTCTACTTGAACCTTAGGCCTGCCAGCAT 40256279 Query 518439 CATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 518498 |||| | ||| | || ||||| | ||||||||| ||||| | | |||||||| Sbjct 40256278 CATTCACAACCATGAAGGGCCAATGTTTCATATCAGATTGGATAACAGCATCATTAAATC 40256219 Query 518499 CTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGAT 518558 || ||||| | | |||| |||||||||| || ||||| ||||| ||||| |||| | Sbjct 40256218 TTCATCCAATAAGTTGTTTGGCATCAAAAACTGTGTTGGTGGGATTCATTGCGACTTGGT 40256159 Query 518559 ATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTG 518618 || || ||||| | |||| || || | ||||| | ||||| ||| || | Sbjct 40256158 TCTTTGCAGCATCACTGATCAATCATTTGGTATTAGTAAAGGTGACATAGCTTGGGGTGG 40256099 Query 518619 TGCGATTACCTTGATCATTCGCAATAATTTCAACTTT 518655 | | || || | |||||| ||||| ||||| || || Sbjct 40256098 TTCAGTTCCCCTAATCATTGGCAATTATTTCCACCTT 40256062 >seq7 Length=66841537 Score = 170 bits (188), Expect = 1e-36 Identities = 897/1412 (64%), Gaps = 24/1412 (2%) Strand=Plus/Minus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 || || ||||| ||||||||||||||||| | ||||| || || ||||| || || || Sbjct 34838123 GCTGTTACATTGAGAATACCATTGGCATCAATGTCAAAGGTCACCTCAATCTGGGGCACT 34838064 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || || | || || ||||| || || || ||| ||||| || || || | Sbjct 34838063 CCCCTGGGTGCCGGAGGGATTCCAGTCAGATCAAAGCGCCCCAGCAGGTTGTTGTCCCGA 34838004 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || | | || ||||| | | ||||| || | | ||||| ||||| || Sbjct 34838003 GTCATGGCCCTCTCGCCCTCATACACCTGGATCAGCACGCCCGGCTGATTGTCTGAGTAG 34837944 Query 517439 GTTGTAAATACTCTGGATTTTTTACAAGGA-ATTGTTGTGTTTCTATCAATAATATTGGT 517497 || || || | |||| | | | | || || || | ||| | | || | || Sbjct 34837943 GTGGTGAAAA-TCTGTGTCTGCTTCGTGGGGATGGTGGAGTTGCGCTTGATTAGTACAGT 34837885 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 ||| | || ||||| || || ||||| | ||| || |||| || || | | | | Sbjct 34837884 CATGACTCCCCCTGCGGTCTCCAAACCTAAAGACAGGGGAGCCACGTCCAACAAAAGCAG 34837825 Query 517558 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 517617 | || | |||||| | | || | | ||| ||||| |||| ||||| ||||| Sbjct 34837824 GTCCTGTACCTTTTCAGACTTATCCCCCATCAAAATGGCTGCCTGAACTGCAGCCCCATA 34837765 Query 517618 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TG 517676 ||||| || ||||| || || | | | || || | |||||| || | | || Sbjct 34837764 GGCAACTGCCTCATCCGGGTTGATGCTCTTGTTGAGATCACGACCATTAAAGTAGTCCTG 34837705 Query 517677 AAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA 517736 || | | | |||||||| || |||| || || || ||||| ||||| ||||| | Sbjct 34837704 CAACAGCCTCTGA-ACCTTAGGGATTCGAGTAGAGCCCCCTACTAAGACAATGTCATGGA 34837646 Query 517737 CCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTC 517796 | | |||||||| || | |||| | | | || || || || || || | | Sbjct 34837645 TTTTAGCTTTATCCATCTTGGCATCCCGAAGAGCCTTCTCCACAGGCTCCAGGGTGCCCC 34837586 Query 517797 TAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TC 517854 |||||| ||||| ||| | ||||| || ||||| || || || | || || || Sbjct 34837585 TAAACAGGTCTGCACACAACTCTTCAAACCGGGCTCTGGT--GATGGATGTGTAGAAGTC 34837528 Query 517855 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 517914 ||| ||||| | | || |||| ||| | | | || || ||| || || | | Sbjct 34837527 AATGCCTTCATAAAGTGAGTCAATTTCCAAGTTGGCCTGGGTGCTAGATGACAGGGTCCT 34837468 Query 517915 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGATTGATTCA 517970 || || | ||||| || || | | | | | || |||| | ||| |||| Sbjct 34837467 CTTGGCCCTCTCACAGGCAGTGCGCAACCGCCTCACAGCCCGCTTGTTCTGGCTGATG-- 34837410 Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 518030 || | |||| ||| |||||||| ||||| ||| | | ||||| | || |||| Sbjct 34837409 --TCCTTCTTATGTTTCCTCTTGAATTCTTCCACAAAGTGGCTCACAAGCCTGTTGTCAA 34837352 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 |||| || || ||||| | || | || | || || | || | |||| ||||| | Sbjct 34837351 AATCCTCTCCACCCAAATGGGTGTCCCCAGCTGTCGCCTTAACCTCAAAAATCCCATCAT 34837292 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT-TC 518149 | | | || | | |||||| || || ||||||| |||||| || | |||| || Sbjct 34837291 CTATGGTCAGCACGGACACATCAAATGTGCCTCCACCCAGATCAAAGATCAAGACATGTC 34837232 Query 518150 ATT-TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208 | || || | || ||| | | ||| ||||| |||| ||||||||||| |||||||| Sbjct 34837231 GCTCTCCCTGACCTGCTTTATCT-AAG-CCATAGGCAATGGCAGCAGCAGTGGGTTCATT 34837174 Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268 |||||||| | ||||| ||||| || || |||||||| || ||||| || | || Sbjct 34837173 GATAATTCTTAGCACATTGAGACCTGCGATAACACCTGCATCCTTGGTGGCCTGACGCTG 34837114 Query 518269 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATA 518328 || || || || || || || ||||| || || |||| || || | || | | | Sbjct 34837113 AGAGTCATTGAAGTAAGCTGGCACAGTGATCACAGCATTGGTGACAGTGTAGCCCAAAAA 34837054 Query 518329 AGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATA 518388 ||| || || | ||||| ||| | | | ||| || || |||| || || || | Sbjct 34837053 AGCCTCAGCAGTCTCCTTCATCTTAGTCAGTACCATAGAAGAGATTTCCTCAGGATAA-A 34836995 Query 518389 TTGCTTGGATT--CATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA 518446 |||| || | |||| || || || | | || || || | || || Sbjct 34836994 AAGCTTTCTTTTCCCCTTTG-TAGGACACCATTACCTTGGGCTTGCCTCCTTCGTTGATT 34836936 Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCA 518506 |||| || ||||| ||||||||||||||| || | |||||||| | ||| || Sbjct 34836935 ACTTGGAAAGGCCAAAGTTTCATATCTGATTGCACGACAGGATCATTAAATTTTCTGCCG 34836876 Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCT 518566 || | ||||| |||||||| | ||| || ||||| || || | |||| ||||| Sbjct 34836875 ATCAGACGTTTGGCATCAAACACAGTGTTCTGGGGATTCATGGCTACCTGATTCTTGGCC 34836816 Query 518567 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 518626 ||||| || || || | || || ||||| || | ||||| || || ||||| || Sbjct 34836815 GCATCGCCGATGAGCCGCTCGGTGTCTGTGAAGGCCACATAGCTGGGGGTGGTGCGGTTG 34836756 Query 518627 CCTTGATCATTCGCAATAATTTCAACTTTACC 518658 || || || || || || || || || || || Sbjct 34836755 CCCTGGTCGTTGGCGATGATCTCCACCTTGCC 34836724 >seq1731 Length=14715 Score = 158 bits (174), Expect = 9e-33 Identities = 305/438 (70%), Gaps = 14/438 (3%) Strand=Plus/Minus Query 517210 ATTATTAGTAATAGTAA--TATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACA 517267 || ||| ||||| |||| | |||| ||||| |||||||||||| ||||| || Sbjct 4674 ATCATTGGTAATTGTAACGTGTTCT--GATTTTCCTGTTGATTTATCCATAGCAGTGACG 4617 Query 517268 TTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGA 517327 || | |||||||| ||||| | ||||||||| || || ||||| || || ||||| | Sbjct 4616 TTCAAGATACCATTTGCATCAATATCAAATGTAACCTCGATTTGTGGTACTCCTCTTGGT 4557 Query 517328 GCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTT 517387 || |||| || || ||| | || |||| || || |||||||| || | | | Sbjct 4556 GCTGGTGCTATTCCACTCAAGTGGAACTTTCCTAGTAGGTTGTTATCTTTTGTCATTGCT 4497 Query 517388 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 517447 | ||| || || || | ||| || || | ||| |||| | |||||||| Sbjct 4496 CTTTCTCCTTCAAATACTTGAATCAACACACCTTCTTGGCGATCTTCGTTTGTTGTAAAG 4437 Query 517448 ACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAAT-AATATTGGTCATAATAC 517505 | | ||| |||| || || |||||||| ||||| | ||| || | | ||||||| || Sbjct 4436 A-TTTGGTTTTTCTTGGTTGGTATTGTTGTATTTCTTTTAATCAACACT-GTCATAACAC 4379 Query 517506 CACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACAT-CAACTAGGACAATATTTTGA 517564 |||| ||||| ||||| ||||| || | |||| ||||| |||| || ||| | |||| Sbjct 4378 CACCAGCTGTCTCTAATCCAAGTGACAATGGAGCGACATCCAACAAGAGCAA-CTCTTGA 4320 Query 517565 AGTTTTTC--ATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 517622 | ||||| || ||| ||| | ||| || ||||| | ||| || |||||||||| Sbjct 4319 ATCTTTTCTGATTGGTT--GCCAGATAAAATGGCAGCTTGTACAGCTGCTCCATATGCAA 4262 Query 517623 CAGCTTCATCAGGATTAA 517640 |||||||||| || |||| Sbjct 4261 CAGCTTCATCTGGGTTAA 4244 Score = 141 bits (156), Expect = 7e-28 Identities = 192/268 (72%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 518445 TAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTAC 518504 |||| ||||||||||| | |||||||||| ||||||| || ||||| || | || | Sbjct 6470 TAACCTTAAATGGCCAATGTTTCATATCTTCTTGAACAGTTCTGTCATCGAACTTCCTTC 6411 Query 518505 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGG 518564 |||| | || ||| || || ||||| || || ||| ||| || | |||| || | Sbjct 6410 CAATAAGTCTTTTGGCGTCGAAAATTGTGTTTTCTGGGTTACGGGCTTCCTGATTCTTAG 6351 Query 518565 CTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 518624 | ||||| ||||||| ||| || || || |||| |||||| || || ||||| | | Sbjct 6350 CGGCATCACCAATCAACCTTTCGGTATCAGTGAATGCAACATAAGAAGGTGTTGTTCTGT 6291 Query 518625 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 518684 ||||||||||||| | ||||||||| || || || || |||| | ||||| Sbjct 6290 TACCTTGATCATTGGGAATAATTTCGACGTTGTTATCTTTGTATACTGCAACACATGAGT 6231 Query 518685 AAGTTGTTCCTAAATCAATACCAATAGC 518712 | ||||| || || ||||| |||||||| Sbjct 6230 AGGTTGTACCCAAGTCAATTCCAATAGC 6203 >seq491 Length=27848 Score = 152 bits (168), Expect = 4e-31 Identities = 198/274 (72%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 518439 CATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 518498 |||| |||| ||||||||||| | |||||||||| |||||| || ||||| || | Sbjct 26702 CATTTGTAACCTTAAATGGCCAATGTTTCATATCTTCCTGAACAGTTCTGTCATCGAATT 26761 Query 518499 CTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGAT 518558 || ||||| | || ||| ||||||||||| || || ||| ||| ||| | || | Sbjct 26762 TCCTTCCAATAAGTCTTTTGGCATCAAAAATTGTGTTTTCTGGGTTACGTGCTTCCTGGT 26821 Query 518559 ATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTG 518618 ||| |||||||| ||||| | ||| || || ||||||| |||||| || || |||| Sbjct 26822 TTTTAGCTGCATCACCAATTAATCTTTCGGTATCAGTAAATGCAACATAAGAAGGTGTTG 26881 Query 518619 TGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 518678 | | |||||||||||||| | ||||||||| || || | || |||| | |||| Sbjct 26882 TTCTGTTACCTTGATCATTGGGAATAATTTCGACGTTGTTGTCTTTGTATACTGCAACAC 26941 Query 518679 AACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 | | ||||| || || ||||| |||||||| Sbjct 26942 ATGAGTATGTTGTACCCAAGTCAATTCCAATAGC 26975 >seq6841 Length=1464 Score = 125 bits (138), Expect = 5e-23 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 ||||||| |||||| |||| ||| || || |||||||| || |||||||| | ||||| | Sbjct 646 TTATCAATACCATATGCAATAGCTGCTGCTGTTGGTTCGTTGATAATTCTAATAACATCA 705 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 |||||||| || | || ||||| ||||| | || | || ||||| ||||||||||| Sbjct 706 AGACCAGCGATGGTACCAGCATCCTTAGTAGACTGACGCTGGGAATCATTAAAATATGCT 765 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGC 518331 ||||| ||||||| || | | || || ||||| | |||||| Sbjct 766 GGAACTGTAATAATTGCCTTTTTAACCTCCTTACCCAGATAAGC 809 Score = 104 bits (114), Expect = 2e-16 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302 ||| ||||||| ||||||||| |||||||| || || ||| ||| |||||| | ||| || Sbjct 654 ACCATATGCAATAGCTGCTGCTGTTGGTTCGTTGATAATTCTAATAACATCAAGACCAGC 713 Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362 || || ||| ||| ||| | || | ||| | ||||||||||||||||| || || Sbjct 714 GATGGTACCAGCATCCTTAGTAGACTGACGCTGGGAATCATTAAAATATGCTGGAACTGT 773 Query 322363 AATAACTGCTTTATTAA 322379 ||||| ||| || |||| Sbjct 774 AATAATTGCCTTTTTAA 790 >seq5 Length=178027732 Score = 104 bits (114), Expect = 2e-16 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 ||||| || || ||||||||||||| ||||||||||| || ||| | || || ||| | Sbjct 150012642 TGTACACTTATCCTGACAGAGGGAGACTCAGCTAAAACTTTAGCTGTTTCAGGCCTTGGT 150012583 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 || |||| ||||| | ||||| |||||||| |||||||||||| | | |||||| | Sbjct 150012582 GTGGTTGGGAGAGACAAGTATGGGGTTTTCCCTCTTAGAGGAAAAATACTCAATGTTCGA 150012523 Query 635561 GATGCTAGTCCTAAA 635575 || ||| || |||| Sbjct 150012522 GAAGCTTCTCATAAA 150012508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780252774208174