Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017 -06-19] 11,479 sequences; 3,438,623,608 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq7 311 1e-79 seq28 257 2e-63 seq6 239 6e-58 seq20 196 6e-45 seq1731 167 3e-36 >seq7 Length=66841537 Score = 311 bits (344), Expect = 1e-79 Identities = 1027/1586 (65%), Gaps = 18/1586 (1%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| ||| |||| || ||||| ||||| | ||||| || || || || || Sbjct 34838243 TCATCCTCAGCTTTGTATTTTTCAGCATCCAGAACCATGCGCTCGATCTCCTCCTTGCTC 34838184 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| ||||| || ||||| | || || |||| | ||| || | Sbjct 34838183 AGCCGGCCCTTGTCATTGGTAATGGTGATCTTGTTGGCCTTGCCCGTGCTCTTGTCCATA 34838124 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || ||||||| | ||||||||| ||||||| || || | || | ||| || || Sbjct 34838123 GCTGTTACATTGAGAATACCATTGGCATCAATGTCAAAGGTCACCTCAATCTGGGGCACT 34838064 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 ||||| ||||| | || || || || | |||||| || || | |||| ||| Sbjct 34838063 CCCCTGGGTGCCGGAGGGATTCCAGTCAGATCAAAGCGCCCCAGCAGGTTGTTGTCCCGA 34838004 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | | | || || ||||| || | || ||| | || ||||| ||| Sbjct 34838003 GTCATGGCCCTCTCGCCCTCATACACCTGGATCAGCACGCCCGGCTGATTGTCTGAGTAG 34837944 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || | ||| || ||| | ||| | || || || | || | | || | ||| Sbjct 34837943 GTGGTGAAAATCTGTGTCTGCTTCGTGGGGATGGTGGAGTTGCGCTTGATTAGTACAGTC 34837884 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | || || || || | || | |||||| || | ||||||||| | | |||| Sbjct 34837883 ATGACTCCCCCTGCGGTCTCCAAACCTAAAGACAGGGGAGCCACGTCCAACAAAAGCAGG 34837824 Query 6989 TCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTAT 7048 || || || ||| | || ||| | || ||||| || || || | ||||| || Sbjct 34837823 TCCTGTACCTTTTCAGACTTATCCCCCATCAAAATGGCTGCCTGAACTGCAGCCCCATAG 34837764 Query 7049 GCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGAT 7108 || || |||||||| ||||| || | || || || || ||| ||||| || ||| Sbjct 34837763 GCAACTGCCTCATCCGGGTTGATGCTCTTGTTGAGATCACGACCATTAAAGTAGTCCTGC 34837704 Query 7109 AACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACT 7168 |||| |||| || |||||||| || || || || || || || || |||| | | Sbjct 34837703 AACAGCCTCTGAACCTTAGGGATTCGAGTAGAGCCCCCTACTAAGACAATGTCATGGATT 34837644 Query 7169 TTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTA 7225 || | |||||| ||||| | || ||||| | || || ||||| |||| | | || Sbjct 34837643 TTAGCTTTATCCATCTTGGCATCCCGAAGAGCCTTCTCCACAGGCTCCAGGGTGCCCCTA 34837584 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 |||| ||| ||||| || ||||| || || | ||| |||||||| ||||| ||| Sbjct 34837583 ---AACAGGTCTGCACACAACTCTTCAAACCGGGCTCTGGTGATGGATGTGTAGAAGTCA 34837527 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | ||| || || | || |||||||| | | | | || | | || || | || | | Sbjct 34837526 ATGCCTTCATAAAGTGAGTCAATTTCCAAGTTGGCCTGGGTGCTAGATGACAGGGTCCTC 34837467 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || | |||||| || || || || || | | || ||| ||| | || || Sbjct 34837466 TTGGCCCTCTCACAGGCAGTGCGCAACCGCCTCACAGCCCGCTTGTTCTGGCTGATGTCC 34837407 Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||||||||||| | || || ||||| ||||| | | || || || ||||| Sbjct 34837406 TTCTTATGTTTCCTCTTGAATTCTTCCACAAAGTGGCTCACAAGCCTGTTGTCAAAATCC 34837347 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 || |||||||| || || ||||| || ||||| || || ||||| || || | || ||| Sbjct 34837346 TCTCCACCCAAATGGGTGTCCCCAGCTGTCGCCTTAACCTCAAAAATCCCATCATCTATG 34837287 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT-TCG-TAT 7583 | | || || |||||||| || || |||||||| ||||| || | || | ||| | | Sbjct 34837286 GTCAGCACGGACACATCAAATGTGCCTCCACCCAGATCAAAGATCAAGACATGTCGCTCT 34837227 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 | | | | | ||||| | || || || || || || || || |||||||| |||| Sbjct 34837226 CCCTGACCTGCT--TTATCTAAGCCATAGGCAATGGCAGCAGCAGTGGGTTCATTGATAA 34837169 Query 7644 TACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 | | || ||| || || || || ||| | ||||| || || || || || || || Sbjct 34837168 TTCTTAGCACA-TTGAGACCTGCGATAACACCTGCATCCTTGGTGGCCTGACGCTGAGAG 34837110 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762 || || ||||| || || || || | || || | ||||| | | || | | | | Sbjct 34837109 TCATTGAAGTAAGCTGGCACAGTGATCACAGCATTGGTGACAGTGTAGCCCAAAAAAGCC 34837050 Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822 || || | || ||||| || || || ||||| || || || || |||| ||| | Sbjct 34837049 TCAGCAGTCTCCTTCATCTTAGTCAGTACCATAGAAGAGATTTCCTCAGGATAAAAAGCT 34836990 Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACC 7882 ||| |||| || || | || | | |||| || || | | || ||| || Sbjct 34836989 TTCTTTTCCCCTTTGTAGGACACCATTACCTTGGGCTT-GCCTC--CTTCGTTGATTACT 34836933 Query 7883 TTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATA 7942 | | | |||| ||||||||| ||| || | || ||| ||||| ||||| Sbjct 34836932 TGGAAAGGCCAAAGTTTCATATCTGATTGCACGACAGGATCATTAAATTTTCTGCCGATC 34836873 Query 7943 AGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCG 8002 ||||| || |||||||| || ||||| | ||| ||||||||| || ||||| ||||| Sbjct 34836872 AGACGTTTGGCATCAAACACAGTGTTCTGGGGATTCATGGCTACCTGATTCTTGGCCGCA 34836813 Query 8003 TCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTC 8062 || ||||| || || || | || || || || || || ||||| || || || Sbjct 34836812 TCGCCGATGAGCCGCTC---GGTGTCTGTGAAGGCCACATAGCTGGGGGTGGTGCGGTTG 34836756 Query 8063 CCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATAC 8122 || |||||||| || || || || || | ||| || | || || ||||| || || Sbjct 34836755 CCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCTGGAACACCCCCACGCAGGAGTAG 34836696 Query 8123 GTTGTTCCTAAATCAATACCGATTGC 8148 || || || | ||||| ||||| || Sbjct 34836695 GTGGTGCCCAGGTCAATGCCGATGGC 34836670 Score = 237 bits (262), Expect = 2e-57 Identities = 787/1214 (65%), Gaps = 24/1214 (2%) Strand=Plus/Plus Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 || || || || || ||||| || | |||||||| || | |||||| || || ||| Sbjct 34830731 GTCTCCAGCCCCAGCGACAGGGGAGCCACGTCCAGCAGCAGCAGGTCCTGCACG--TTC- 34830787 Query 7004 TTCC--CTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059 ||| ||| | ||| | | |||||| || || |||| |||||||||||| |||||||| Sbjct 34830788 -TCCGACTTGTCCCCCATCAGGATGGCCGCCTGCACCGCCGCCCCGTATGCCACCGCCTC 34830846 Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTG 7119 |||||||| || | || || || || ||||| || | ||| | || | || Sbjct 34830847 GTCGGGGTTGATGCTCTTGTTGAGGTCGCGCCCGTTGAAGAAGTCCTGCAGCAGCTTCTG 34830906 Query 7120 AATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATC 7179 | || ||||| || || || || || |||| || | || | | | || || || Sbjct 34830907 CACCTTGGGGATGCGGGTGGAGCCCCCCACCAGGACCAGGTCGTGGATCTGCGCCTTGTC 34830966 Query 7180 GATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCAT 7239 | ||| | ||| || || | || || || || |||| | ||||||| ||| Sbjct 34830967 CAGCTTGGCGTCGCGCAGAGCCTTCTCCACGGGCTCCAGGGTGCTCCGGAACAGGTCGGA 34831026 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 ||||| ||||| || || || | ||| ||||| || ||||| || | ||| ||| | | Sbjct 34831027 GCACAGCTCCTCGAACCGCGCCCTGGTGATGGACGTGTAGAAGTCGATGCCCTCGAACAG 34831086 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 || || || || | | | | || | | || || || || | ||| || ||||| || Sbjct 34831087 GGAGTCGATCTCCAGGCTGGCCTGGGTGCTGGACGACAAGGTCCTCTTGGCCCGCTCGCA 34831146 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 |||||| || | || | | ||| ||| ||| | || || ||||| || || | Sbjct 34831147 CGCCGTGCGCAGCCGCCTCACGGCCCGCTTGTTCTGGCTGATGTCCTTCTTGTGCTTCCT 34831206 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || ||||| || |||||| | || || ||||| || || || |||| ||| Sbjct 34831207 CTTGAACTCCTCCACGAAGTGGTTCACCAGCCTGTTGTCGAAGTCCTCCCCGCCCAGGTG 34831266 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || ||||| || || || || || || ||||| || | || || | | | || || Sbjct 34831267 CGTGTCCCCGGCCGTGGCCTTCACCTCGAAGATGCCGTCGTCGATCGTCAGGATGGACAC 34831326 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTATCGTCGTCTTTG---T 7595 || |||||||| || || |||||||| ||||| ||||| || || | ||| Sbjct 34831327 GTCGAACGTACCCCCGCCGAGGTCAAAGATGAGCACGTTGCG----CTCCCCCTTGCCCG 34831382 Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 || | || || ||||| ||||| || || ||||| || || || || || | || || Sbjct 34831383 TCCTGTCCAGGCCGTAGGCGATGGCGGCGGCCGTGGGCTCGTTGATGATCCTCAGCACGT 34831442 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 |||| || || || |||| || || || || || || ||||| ||||| ||||||| Sbjct 34831443 TCAGCCCCGCGATCACCCCCGCGTCCTTGGTGGCCTGCCGCTGCGAGTCGTTGAAGTAGG 34831502 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 |||| || || | ||||||| || || | || || |||| || ||||| || | Sbjct 34831503 CCGGCACGGTGATCACCGCGTTGGTCACCGGGTGGCCCAGGTACGCCTCGGCGATCTCCT 34831562 Query 7776 TCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGT 7835 |||| ||||| | |||||||| || ||||| || | ||| || || || || | Sbjct 34831563 TCATCTTGGTCAACACCATCGACGAGATCTCCTCCGGGTAGAACGCCTTGGTCTCCCCCT 34831622 Query 7836 T-AAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAA 7894 | | ||| || | | | | || || | | | || ||| || | | ||| Sbjct 34831623 TGTAGCTCACCTGC-ACCTTAGGCTTGT---CTCCGTCGTTGATCACGCGGAAAGGCCAG 34831678 Query 7895 TCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCA 7954 | ||||| || || ||| |||| ||||| | ||||| || ||||| || Sbjct 34831679 TGCTTCATGTCCGACTGCACCACCGGGTCGCCGAACTTGCGGCCGATCAGCCGCTTCGCG 34831738 Query 7955 TCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGA 8014 || || || ||||| | ||||||| || |||||||| ||||| || ||||| || Sbjct 34831739 TCGAACACGGTGTTCTGCGGGTTCAGCGCCACCTGGTTCTTGGCCGCATCGCCGATGAGC 34831798 Query 8015 CGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTC 8074 || || | || || || || || || ||||| || || || || |||||||| Sbjct 34831799 CGCTC---GGTGTCGGTGAAGGCCACATAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTG 34831855 Query 8075 GCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAA 8134 || || || || || | ||| || | || || ||||| || || || || || | Sbjct 34831856 GCGATGATCTCCACCTTGCCGTGCTGGAACACCCCTACGCAGGAGTAGGTGGTGCCCAGG 34831915 Query 8135 TCAATACCGATTGC 8148 || || || || || Sbjct 34831916 TCGATGCCAATCGC 34831929 >seq28 Length=82073021 Score = 257 bits (284), Expect = 2e-63 Identities = 792/1215 (65%), Gaps = 20/1215 (2%) Strand=Plus/Plus Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 || |||| || || |||| || |||||||| | || | |||||| || || ||| Sbjct 47234647 GTCTCGATGCCCAGGGACAACGGGGTCACGTCGAGTAGCAGCAGGTCCTGTACG--TTCT 47234704 Query 7004 TTCCCTTCACCC-GTTAAGA-TGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCAT 7061 | ||| ||| | | ||| |||| || || |||| || ||||| || || ||||| | Sbjct 47234705 CTGACTTGTCCCCGATGAGAATGGCCGCCTGCACCGCGGCTCCGTAGGCCACTGCCTCGT 47234764 Query 7062 CGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAA 7121 ||||||| || | || ||||| || ||||| || || |||| | || | || | Sbjct 47234765 CGGGGTTGATGCTCTTGTTCAGCTCCTTACCATTGAAGAAATCTTGCAGCAGCTTCTGGA 47234824 Query 7122 TTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGA 7181 | || ||||| || || || || || |||| ||||| || | | | || || | Sbjct 47234825 TCTTAGGGATGCGAGTGGAGCCGCCCACCAGCACGATCTCCTGGATCTGGCCCTTGTCCA 47234884 Query 7182 TCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATAC 7241 ||| | || || || | || || || || |||| ||||| | ||| Sbjct 47234885 GCTTGGCATCGCGCAGAGCCTTCTCCACCGGCTCCAGGGTCCCGCGGAAAAGGTCTGCGT 47234944 Query 7242 ACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACG 7301 || ||||| || || || ||||| ||||| || |||||||| ||||| ||||| | || Sbjct 47234945 TGAGCTCCTCGAAGCGGGCGCGGGTGATGGACGTGTAGAAATCCACGCCCTCGTAGAGCG 47235004 Query 7302 AATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 | || || || ||| | | || | | ||| | || ||||| |||||||| || | Sbjct 47235005 AGTCGATCTCGATGCTGGCCTGCGTGGACGAGCTCAGGGTGCGCTTGGCGCGCTCGCAGG 47235064 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | || || | || || | |||||| ||| | ||| || ||||| || || |||| Sbjct 47235065 CGGTGCGGAGTCGCCGCACCGCACGCTTGTTGGGTGCAATGTCCTTCTTGTGCTTGCGTT 47235124 Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481 | ||||| || | | ||| | | | | |||||| || || || |||| || | Sbjct 47235125 TGAACTCCTCCGCCAGGTGGCTCACCATGCGGTTATCGAAGTCCTCCCCGCCCAGATGAG 47235184 Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541 | || || || || | || ||||| ||||| || | || ||| | | | || || | Sbjct 47235185 TGTCGCCAGCCGTGGACTTCACTTCGAAGATGCCGTCCTCGATGGTCAGGATGGACACGT 47235244 Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------T 7595 | || || || || |||||||| || ||||| |||||| | ||| | | | | Sbjct 47235245 CGAAGGTGCCGCCGCCCAGGTCGAAGATGAGCACGTTCTTCTCGCCTCCCGCGCAGCCCT 47235304 Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 |||| || || ||||| || || ||||||||||| || || || || || || || || Sbjct 47235305 TCTTGTCCAGGCCGTAGGCAATGGCCGCCGCCGTGGGCTCGTTGATGATGCGCAGCACGT 47235364 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 | ||||| | ||| || |||| || || || || || || ||||| || || || |||| Sbjct 47235365 TGAGGCCCGTAATGGTGCCCGCGTCCTTGGTGGCCTGGCGCTGCGAGTCATTGAAATAGG 47235424 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 ||||||| || | ||||||| | || || || || || | ||| || || || | Sbjct 47235425 CCGGGACGGTGATGACCGCGCTCTGCACCTTGCCCCCCAGGTAGGCTTCGGCAATCTCCT 47235484 Query 7776 TCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCG 7834 ||||||| || || ||||| || || ||||| || | | | | || || | || || Sbjct 47235485 TCATTTTAGTGAGGACCATGGAGGAGATCTCCTC-GGGGAAGAAGGTCTTGATCTCTCCT 47235543 Query 7835 TTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAA 7894 || | || || | | |||| || | | | || | ||| ||| ||| Sbjct 47235544 TTGTACTCCACCTGCACTTTGGGCTT---CCCTCCCTCGCTCACCACCCGGAACGGCCAG 47235600 Query 7895 TCTTTCATATCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGC 7953 | ||||| || || | |||| | |||| ||||| | ||||| || | ||| || Sbjct 47235601 TGCTTCATGTCTGACTGCA-CTGTGGCGTCCTCGAACTTCCGACCGATCAGCCTCTTGGC 47235659 Query 7954 ATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAG 8013 || || | ||||| ||||||||||||| |||||||| || || || ||||| || Sbjct 47235660 GTCGAAGATGGTGTTGGTGGGGTTCATGGCCACCTGGTTCTTGGCTGCATCGCCGATGAG 47235719 Query 8014 ACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTT 8073 || || | || || || || ||||| ||||| || || || || |||||||| Sbjct 47235720 GCGCTC---GGTGTCGGTGAAGGCCACGTAGCTGGGGGTGGTACGGTTGCCCTGGTCGTT 47235776 Query 8074 CGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAA 8133 || || || || || | | | ||| |||| || |||||||| || || || || | Sbjct 47235777 GGCGATGATCTCCACCTTGCCATGTTGGAAGACCCCCACGCACGAGTAGGTGGTGCCCAG 47235836 Query 8134 ATCAATACCGATTGC 8148 || || || || || Sbjct 47235837 GTCGATGCCAATAGC 47235851 >seq6 Length=73112236 Score = 239 bits (264), Expect = 6e-58 Identities = 981/1533 (64%), Gaps = 54/1533 (4%) Strand=Plus/Minus Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624 ||| ||||||||| ||| ||||| || || ||||| ||||||| |||||||| || || Sbjct 40257552 CTTCTCATCTTCAGCTTCGTACTTCTCTGCTTCTTGAACCATCTGCTCAATGTCATCCTT 40257493 Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGC-CTTA 6682 || | ||||| ||||| || | |||||||| ||| ||| || | || |||| Sbjct 40257492 GCTCAAACGGCCCTTGTCATTAGTGACGGTAATCTTGTTCTC--TTATCCTATGCTCTTA 40257435 Query 6683 TCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGT 6742 || ||||| ||||| | ||| ||||| ||||||| ||| || | || | ||| || Sbjct 40257434 TCCACAGCAGAGACATTGAGAATGCCATTGGCATCAATATCAAAAGTGACTTCAATCTGA 40257375 Query 6743 GGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTA 6802 || ||| | || || | || || || || | ||| | | ||| | || ||||| Sbjct 40257374 GGAACACCACGTGGGGCAGGAGGTATGCCTGTGAGTTCACACTTGCCAGGCAAGTTGTTA 40257315 Query 6803 TCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCT 6862 ||| | | | | | || |||||| |||| || | ||| || |||| || || || Sbjct 40257314 TCCTTGGTCATGGTTCGCTCACCTACATAAACCTCAATGAGTACACCAGGCTGCTTGTCA 40257255 Query 6863 TGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACC 6922 || | ||| | || | ||| | ||||| || | ||| | | || Sbjct 40257254 GAGTAGGTGGTGAAAGTCTGCGTCTGCTTTGTAGGAATGGTGGCATTGTGCTTGAGGACA 40257195 Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGT 6982 | |||| | |||||| |||||| | |||||| | ||||| || || ||||| || Sbjct 40257194 G---TCATGACACCACCGGCAGTTTCAATTCCAAGGGGAAGAGGAGTGACATCCAACAGC 40257138 Query 6983 AACAGGTCTTGAACAGATTCG---TTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTC 7039 | || |||||||||| ||| || || || || | ||||| | ||||| | Sbjct 40257137 AGCAAGTCTTGAACATTTTCAGATTTGTCTCCAGACG---AAATGGCTACCTGGACAGCT 40257081 Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || |||| | |||||| ||||||| || | ||||| | |||||| || || || Sbjct 40257080 GCACCACATGCAAGAGCCTCACCGGGGTTGATGCTCTTATTTAATTCTTTCCCATTGAAG 40257021 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | || | | || | ||| || ||||| || || || ||||| ||||| || || Sbjct 40257020 AAGTCTTGGAGAAGTTTCTCAATCTTGGGGATGCGGGTTGAGCCACCAACCAAGACAATA 40256961 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 || | | | || || || | ||| | || ||||| | ||| || | ||| |||| Sbjct 40256960 TCGTGGATCTGGGACTTGTCCAGCTTAGCATCCCGAAGGGCTTTCTCCATAGGGTCCAGG 40256901 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||||||| | || ||| ||||| || | Sbjct 40256900 GTGCCACGGAACAAGTCAGCATTCAATTCTTCAAATCG---------------------G 40256862 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || | | || || || | |||||||| ||||| | | || | | ||||| | Sbjct 40256861 AAGTTGATTCCTTCATAGACGGAATCAATCTCAATATTGGCCTGGGTGCTGGAAGAGAGA 40256802 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||| || ||||| | | || | | || | || | | ||| | Sbjct 40256801 GTGTGCTTAGCAAGCTCAGAAGTAGTATAGAGGCAACAGACAGCCCTCTTGTTCTCCCTG 40256742 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGAAGGAGTC-TCGAAT 7457 ||||||||||| ||||| | || ||||||||| ||| | || || | | | | Sbjct 40256741 ATATCTTTCTTGTGTTTGCTCTTGAACTCTTCAATGAAATGGTTGACCTTGCCATTG--G 40256684 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 ||| ||||| ||| ||| ||||| || || | | |||||| |||||||| || Sbjct 40256683 CGACGTCTTCTCCAGACAA----GTATCTCCAGCTATAGATTTGACCTCAAAGATTCCAT 40256628 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | ||||| | | | || ||||||| | |||||||||| ||||| || || || | Sbjct 40256627 CCTCAATAGTGAGGACTGACGCATCAAA-ATGCCACCACCCAAATCAAAGATCAGCACAT 40256569 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 | | || | | || || || | || || || |||| | || ||||||||| Sbjct 40256568 TTCTCTCTGCTCCAACCTTTTTGTCTAAGCCATAGGCAGTAGCAACAGCAGTTGGTTCAC 40256509 Query 7638 TAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 | || || | ||| ||| | ||| ||||||| ||| | |||||||| || || || || Sbjct 40256508 TGATGATTCTAAGTACA-CTGAGG-CAGCAATGGTTCCAGCATCTTTGGTAGCCTGACGC 40256451 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | || |||||||| || || || | || || || | || || |||| || || Sbjct 40256450 TGACAGTCATTAAAGTAAGCAGGTACTATGACAACAGCATTGGTAACAGTCTTCCCAAGG 40256391 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC-AGCCGC 7815 | | ||| ||||| || ||||| ||||| || ||||| ||||| | ||| || | Sbjct 40256390 CAGGCTTCTGCGATTTCCTTCATCTTGGTCAGGACCATGGATGACACCTCCTCTGGATAA 40256331 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 ||||| ||| || || || || | || |||| || | | || | ||||| | Sbjct 40256330 AAACTCTTT-GTCTCTCCCTTGTATTCTACTTGAACCTTAGGCCT---GCCAGCATCATT 40256275 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 | |||| | | | ||||| ||||||||| ||||| || ||| ||| Sbjct 40256274 CACAACCATGAAGGGCCAATGTTTCATATCAGATTGGATAACAGCATCATTAAATCTTCA 40256215 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||| ||||| | || ||||||||||||||||| |||| ||||| || ||||||||| Sbjct 40256214 TCCAATAAGTTGTTTGGCATCAAAAACTGTGTTGGTGGGATTCATTGCGACTTGGTTCTT 40256155 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || | ||| | | || |||| ||||| | ||| || |||||| || Sbjct 40256154 TGCAGCATCACTGATCAATCATTTGGTATT---AGTAAAGGTGACATAGCTTGGGGTGGT 40256098 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 || ||||| | || || ||||| ||||| || Sbjct 40256097 TCAGTTCCCCTAATCATTGGCAATTATTTCCAC 40256065 >seq20 Length=149338601 Score = 196 bits (216), Expect = 6e-45 Identities = 801/1260 (64%), Gaps = 6/1260 (0%) Strand=Plus/Plus Query 6889 CTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTC 6948 ||| | ||| || || | ||| ||| | || | | ||||| | ||||| || || Sbjct 9962645 CTTGGTTGGGATAGTGGCATTCCTCTGGATCAGTGTAGTCATCACCCCACCAGCTGTCTC 9962704 Query 6949 GAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCC 7008 || || |||||||| || | ||| |||| || | || || || || || | Sbjct 9962705 TAGCCCCAGAGACAGGGGAGCCACATCCAGCAGCAGGAGATCCTGCACCTTCTCACACGT 9962764 Query 7009 TTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTT 7068 || ||| | || | || || || || | ||||| || || || || ||||| ||||| Sbjct 9962765 GTCGCCCATCAACACTGCTGCCTGCACGGCAGCCCCATAAGCCACAGCTTCATCCGGGTT 9962824 Query 7069 AATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGG 7128 || | || ||||| || | || || || | ||| | | | || | || || Sbjct 9962825 GATGCTCTTGTTCAGCTCCCTGCCATTGAAGAAGTCCTGCAGGAGCTTCTGTACCTTGGG 9962884 Query 7129 GATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGA 7188 |||||| || || ||||| ||||| || || |||| | | | || || | ||| | Sbjct 9962885 GATTCGGGTAGAGCCACCCACCAAGACAATGTCATGGATCTGGGCCTTGTCCAGCTTGGC 9962944 Query 7189 GTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTC 7248 || || | | || || || || |||| | ||||| | |||| |||||||| Sbjct 9962945 ATCCCGCAAGGCCTTCTCCACCGGCTCCAGGGTGCTGCGGAAGAGGTCCGAGCACAGTTC 9963004 Query 7249 CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAAT 7308 ||||| || || || || || || || ||||| || || || || | | ||||| || Sbjct 9963005 TTCAAAGCGGGCTCGAGTGATAGAAGTGTAGAAGTCTACACCCTCAAACAGGGAATCGAT 9963064 Query 7309 TTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368 || | || | || | | || || | || | ||| |||||||| || ||||| || Sbjct 9963065 CTCCAGAGTGGCCTGGGTACTGGACGACAGGGTGCACTTGGCGCGCTCGCAGGCCGTGCG 9963124 Query 7369 TAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428 | | || ||||| ||| ||| | | | ||| ||| || || || ||||| Sbjct 9963125 GAGCCTGCGCAGGGCCCGCTTGTTCCTGCTCAAATCCTTCCCGTGCTTCCGCCGGAACTC 9963184 Query 7429 TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 || | |||||| | || | ||||| || || ||||||| ||| || || || Sbjct 9963185 CTCCGTGAAGTGGTTCACCAGCCGGTTGTCGAAGTCCTCTCCACCCAGGTGAGTGTCTCC 9963244 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 || || || || || ||||||| ||| | || ||| | | | ||| || || || || Sbjct 9963245 AGCCGTGGCCTTCACCTCAAAGACACCAGCGTCGATGGTGAGGACCGACACGTCGAAGGT 9963304 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACC 7608 || ||||||||||| |||||||| ||||| || || | | || || || Sbjct 9963305 GCCCCCACCCAGGTCGAAAATGAGCACGTTGCGCTCCCCGGCGCCCAGCCGGTCCAGGCC 9963364 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 ||| ||||| || || ||||| || || || || || | || ||| || || || || Sbjct 9963365 GTAGGCGATGGCAGCTGCCGTGGGCTCGTTGATGATCCTCAGGACGTTGAGCCCCGCGAT 9963424 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 | ||||||| || || || || || ||||| ||||| |||||||| || ||||| | Sbjct 9963425 GGCACCCGCATCCTTAGTGGCCTGCCGCTGCGAGTCGTTGAAGTAGGCGGGCACCGTGAT 9963484 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 || |||| | | || || || || |||| ||||| | || ||||| ||| | || Sbjct 9963485 CACAGCGTGCTTCACGGGCTGGCCCAGGTACGCCTCCGCCGTCTCCTTCATCTTGCTCAG 9963544 Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTC 7848 ||||| || || ||||| || | ||| || || ||| | || Sbjct 9963545 CACCATGGACGAGATCTCCTCGGGGTAGAACGCCTTGTCCTCCCCGCGGTAGGACACGCG 9963604 Query 7849 AATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908 | | |||| || |||| | || | |||| | | ||| | |||| || Sbjct 9963605 CACCTTGGGCTT-GCCGC--CCTCGCTCACCACCTGGAAGGGCCAGTGCTTCACGTCCGA 9963661 Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 || || |||||| ||| | | ||||| || ||||| | || || || ||||| Sbjct 9963662 CTGCACAGTGGGGTCCGCGAACCTGCGCCCGATCAGTCGCTTGACGTCGAACACGGTGTT 9963721 Query 7969 TTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTC 8028 | ||||||| ||| | ||| |||| |||||||| || | || || || || Sbjct 9963722 GTGCGGGTTCAGGGCCGCCTGGCTCTTGGCCGCGTCGCCCACCAGCCGCTC---GGAGTC 9963778 Query 8029 CGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 || || || ||||| ||||| || || || || |||||||| || | || || || Sbjct 9963779 TGTGAAGGCCACGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGAGGATCTCCAC 9963838 Query 8089 GCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||| ||| || | ||||| |||||||| ||||| || || | || || || || || Sbjct 9963839 CCGGCCGTGCTGGAACACGCCCACGCACGAGTACGTGGTGCCCAGGTCGATGCCTATGGC 9963898 >seq1731 Length=14715 Score = 167 bits (184), Expect = 3e-36 Identities = 360/539 (67%), Gaps = 12/539 (2%) Strand=Plus/Minus Query 6566 TTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTC 6625 ||||||||||| || || || ||||| || |||| ||||| || || ||||||| Sbjct 4748 TTTTCATCTTCTTCCTTGTATTTTTCGGCCTCTTCAACCATACGGTCTATCTCTTCTTGG 4689 Query 6626 GATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCT 6685 || | ||||||||||| ||||| |||| | ||| ||||| || | | ||||| Sbjct 4688 CTCAAGCGTCCCTTATCATTGGTAATTGTAACGTGTTCTGATTTTCCTGTTGATTTATCC 4629 Query 6686 TCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGT 6745 |||| | || ||||| |||||||||||||||| ||| || | || | ||||||||| Sbjct 4628 ATAGCAGTGACGTTCAAGATACCATTTGCATCAATATCAAATGTAACCTCGATTTGTGGT 4569 Query 6746 GTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCC 6805 || || ||||| | || || || | || | || | || |||| ||||||| Sbjct 4568 ACTCCTCTTGGTGCTGGTGCTATTCCACTCAAGTGGAACTTTCCTAGTAGGTTGTTATCT 4509 Query 6806 GTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGT 6865 | | | | | ||| |||||| | |||| ||| ||| | ||| ||||| Sbjct 4508 TTTGTCATTGCTCTTTCTCCTTCAAATACTTGAATCAACACACCTTCTTGGCGATCTTCG 4449 Query 6866 GCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGG 6925 |||| |||||||| | |||||| | ||| || || |||||||| ||| | | Sbjct 4448 TTTGTTGTAAAGATTTGGTTTTTCTTGGTTGGTATTGTTGTATTTCTTTTAATCAACACT 4389 Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||||| |||||| || || | |||||| |||| || | || ||||| | | | Sbjct 4388 GTCATAACACCACCAGCTGTCTCTAATCCAAGTGACAATGGAGCGACATCCAACAAGAGC 4329 Query 6986 AGGTCTTGAA------CAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTC 7039 | ||||||| | |||| ||| || | ||| ||||| ||||| || | Sbjct 4328 AACTCTTGAATCTTTTCTGATTGGTT------GCCAGATAAAATGGCAGCTTGTACAGCT 4275 Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAA 7098 || || ||||| || || ||||| |||||||| | | | ||||||| || ||||| Sbjct 4274 GCTCCATATGCAACAGCTTCATCTGGGTTAATTGATCTGCATGGTTCTTTTCCATTAAA 4216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635041666382360