Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017
-06-19] 11,479 sequences; 3,438,623,608 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1731 170 1e-36
seq491 167 2e-35
seq426 134 9e-26
seq6841 129 4e-24
seq6 113 3e-19
seq1410 111 1e-18
seq796 105 4e-17
seq2706 104 2e-16
seq5647 100 2e-15
seq24 100 2e-15
seq11 87.8 1e-11
seq5 87.8 1e-11
>seq1731
Length=14715
Score = 170 bits (188), Expect = 1e-36
Identities = 284/397 (72%), Gaps = 10/397 (3%)
Strand=Plus/Plus
Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852
|| || ||||||||||||||||||||||| ||||| ||||| || |||||||| || |||
Sbjct 4246 AACCCAGATGAAGCTGTTGCATATGGAGCAGCTGTACAAGCTGCCATTTTATCTGG-CAA 4304
Query 475853 TCAGACGAGAAACTAAATAATA-TTGTACTTGTTG-ACGTAACTCCACTTTCATTAGGTC 475910
|| | ||||| | || | ||| ||||||| | || ||||| | ||| | ||
Sbjct 4305 CCAATC-AGAAAAGATTCAAGAGTTGCTCTTGTTGGATGTCGCTCCATTGTCACTTGGAT 4363
Query 475911 TTGAAACAGTTGGAGGGATTATGACTAATCTT-ATTGACAGAAATACTCCTATCCCATGC 475969
| || |||| ||| || ||||||| | | || ||| | |||||||| | || ||| |
Sbjct 4364 TAGAGACAGCTGGTGGTGTTATGAC-AGTGTTGATTAAAAGAAATACAACAATACCAACC 4422
Query 475970 AA-AAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028
|| |||| | ||| | ||| | || | ||| ||| | ||| || ||| |
Sbjct 4423 AAGAAAAACCAAA-TCTTTACAACAAACGAAGATCGCCAAGAAGGTGTGTTGATTCAAGT 4481
Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGA 476088
|||||||| |||||| | | || |||||||| ||| ||| |||| || | |||||
Sbjct 4482 ATTTGAAGGAGAAAGAGCAATGACAAAAGATAACAACCTACTAGGAAAGTTCCA-CTTGA 4540
Query 476089 A-GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATG 476147
|| || | || || || |||||||| || ||||| || ||||| |||||||||||||
Sbjct 4541 GTGGAATAGCACCAGCACCAAGAGGAGTACCACAAATCGAGGTTACATTTGATATTGATG 4600
Query 476148 CAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184
|||||||||| | || || |||||| ||||||||
Sbjct 4601 CAAATGGTATCTTGAACGTCACTGCTATGGATAAATC 4637
Score = 143 bits (158), Expect = 2e-28
Identities = 195/272 (72%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388
|| ||||| ||||| || || || || ||| ||||| || || | || || ||
Sbjct 6203 GCTATTGGAATTGACTTGGGTACAACCTACTCATGTGTTGCAGTATACAAAGATAACAAC 6262
Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448
|| ||||| ||| ||||||| |||||||| ||||||||||| || |||||| | || |||
Sbjct 6263 GTCGAAATTATTCCCAATGATCAAGGTAACAGAACAACACCTTCTTATGTTGCATTCACT 6322
Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508
|| || ||| | ||||| ||||| ||||| |||| | || ||| || | ||
Sbjct 6323 GATACCGAAAGGTTGATTGGTGATGCCGCTAAGAATCAGGAAGCCCGTAACCCAGAAAAC 6382
Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568
|| ||||| || || |||||| | ||||| | || || ||||| | ||||| |||
Sbjct 6383 ACAATTTTCGACGCCAAAAGACTTATTGGAAGGAAGTTCGATGACAGAACTGTTCAAGAA 6442
Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAA 474600
|||||| |||||||| |||||||| | |||
Sbjct 6443 GATATGAAACATTGGCCATTTAAGGTTACAAA 6474
>seq491
Length=27848
Score = 167 bits (184), Expect = 2e-35
Identities = 253/357 (71%), Gaps = 5/357 (1%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388
|| ||||| ||||| || || || || ||| ||||| || || | || | ||
Sbjct 26975 GCTATTGGAATTGACTTGGGTACAACATACTCATGTGTTGCAGTATACAAAGACAACAAC 26916
Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448
|| ||||| ||| ||||||| |||||||| ||||||||||| || |||||| | ||||||
Sbjct 26915 GTCGAAATTATTCCCAATGATCAAGGTAACAGAACAACACCTTCTTATGTTGCATTTACT 26856
Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508
|| || ||| | ||||| ||||| |||||| | || | ||| ||| || | ||
Sbjct 26855 GATACCGAAAGATTAATTGGTGATGCAGCTAAAAACCAGGAAGCACGTAACCCAGAAAAC 26796
Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568
|| ||||||||||| |||||| | ||||| | || || ||||| | ||||| ||
Sbjct 26795 ACAATTTTTGATGCCAAAAGACTTATTGGAAGGAAATTCGATGACAGAACTGTTCAGGAA 26736
Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATG---TTGGTGGTAAACCATATATAGAA 474625
|||||| |||||||| |||||||| | ||||| | ||||||||| |||| |||
Sbjct 26735 GATATGAAACATTGGCCATTTAAGGTTACAAATGGACCAAGCGGTAAACCAAATATCGAA 26676
Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCAC-CGGAACAAATTTCTTCAATGGT 474681
| | | | |||||||| || | || ||| | || ||||||| || |||||
Sbjct 26675 GTTACATTCCAAGGTGAAA-AGAAGACCTTCCACGCAGAGGAAATTTCCTCTATGGT 26620
>seq426
Length=37308
Score = 134 bits (148), Expect = 9e-26
Identities = 195/274 (71%), Gaps = 10/274 (4%)
Strand=Plus/Minus
Query 297323 TTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTG 297382
|||| |||||||||| |||| || |||||||||| | | || || || || ||||
Sbjct 18500 TTTTTGATTGTTGGTATGAAAGTGGATCTATGCCTTTAGCAAAGATACACTACCCATTTG 18441
Query 297383 AAAATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAA 297442
||||| || | |||||| | | || | ||| |||||||| | |||
Sbjct 18440 AAAATAAGGATAATTTAGATAAGTT------TTTTCCGGCAAATTTTATAGCTGAAGGGT 18387
Query 297443 TTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACA 297502
| ||||| ||||| |||||||||||||| || ||| |||||||| | ||||| |
Sbjct 18386 TAGATCAGACAAGGGGTTGGTTTTATACATTGACAGTAATTTCTACACATTTATTTGGTA 18327
Query 297503 AACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAA 297562
|| | | ||||||||||| ||||||| ||| |||| ||||||||||| |||| |
Sbjct 18326 AAGTACCTTTTAAAAATGTTATTGTTAATGGACTTGTGTTGGCAGCTGATGGGAAAAAGA 18267
Query 297563 TGTCAAAAAG--TAAAGGTAATTATCCTGATCCA 297594
|||||||||| | ||| ||||| || ||||||
Sbjct 18266 TGTCAAAAAGACTTAAG--AATTACCCAGATCCA 18235
>seq6841
Length=1464
Score = 129 bits (142), Expect = 4e-24
Identities = 112/139 (81%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
||| | ||||| ||||||||||||||||||||||| || ||||| | ||||| |||||
Sbjct 782 GCAATTATTACAGTTCCAGCATATTTTAATGATTCCCAGCGTCAGTCTACTAAGGATGCT 723
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856
|| | || || |||||| ||||| | | ||||| || |||||||||||||| || ||
Sbjct 722 GGTACCATCGCTGGTCTTGATGTTATTAGAATTATCAACGAACCAACAGCAGCAGCTATT 663
Query 474857 GCTTATGGTCTTGATAAGA 474875
|| |||||| |||||||||
Sbjct 662 GCATATGGTATTGATAAGA 644
Score = 93.3 bits (102), Expect = 3e-13
Identities = 258/389 (66%), Gaps = 20/389 (5%)
Strand=Plus/Minus
Query 475539 AAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAAT-ACTCTTATTACA 475597
|||||||| ||||| |||| | | |||| |||| || | | || | | | | |||
Sbjct 373 AAACTACTCTTGAAATTGAAGATTTACTTGATGGAAAGGACTTTCATGAAACAT-TAACA 315
Query 475598 AGGGCTAAATTTGAAGATATTTG--TTCTGATCTCTTTAGAAAAACAATTGAACCCGTTG 475655
|| || || |||||| | ||| | ||||| ||| ||||| || || | |||
Sbjct 314 AGAGCAAAGTTTGAA--TCATTGAATGAAGATCTATTTGAGAAAACTATGGATACTGTTA 257
Query 475656 AACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAG 475715
|| ||| |||| ||| ||| | | |||||| | | || | |||||||| ||||
Sbjct 256 AAGCAGTACTCAAAGAAGCTAGAATGTCTAAATCAGATATTAATCAGATTGTTCTAGTAG 197
Query 475716 GAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAA 475775
|||| ||||| ||||| || ||| | ||||| ||| | |||||| || |||
Sbjct 196 GAGGATCAACCAGAATACCTAAAGTTAGAGAGATGATCAAGGAATATTTCAAC---AAAG 140
Query 475776 AGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAG 475835
| | ||| || | ||| | |||||||| || ||||| ||||| || | |||| ||
Sbjct 139 ACCCAGATGTTAGCATTAATGCAGATGAAGCAGTAGCATACGGAGCAGCAATGCAAGGAG 80
Query 475836 CTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTG-ACGTAACT 475894
||| || |||| ||||| || || | | || ||||||| | ||| |
Sbjct 79 GTATATTGACAGGAGAATCAT--------CTCAAGATT--TGCTCTTGTTGGATGTATGT 30
Query 475895 CCACTTTCATTAGGTCTTGAAACAGTTGG 475923
||||||||||| ||| | || ||||||||
Sbjct 29 CCACTTTCATTGGGTATAGAGACAGTTGG 1
Score = 91.5 bits (100), Expect = 1e-12
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 290823 CAAGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGAC 290882
||| |||||||| | | |||||||||||||| || |||||||| | ||||||||||
Sbjct 650 CAATACCATATGCAATAGCTGCTGCTGTTGGTTCGTTGATAATTCTAATAACATCAAGAC 709
Query 290883 CTGCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGA 290942
| || || | | | ||| ||| | ||| || || | |||||||||||| || || |
Sbjct 710 CAGCGATGGTACCAGCATCCTTAGTAGACTGACGCTGGGAATCATTAAAATATGCTGGAA 769
Query 290943 CTGTAATAACAGCTTTTT 290960
||||||||| || ||||
Sbjct 770 CTGTAATAATTGCCTTTT 787
>seq6
Length=73112236
Score = 113 bits (124), Expect = 3e-19
Identities = 353/538 (66%), Gaps = 9/538 (2%)
Strand=Plus/Plus
Query 474386 AAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTT 474445
|| || ||||||||||||||||| | || || |||| || ||| ||||| | |||
Sbjct 40256062 AAGGTGGAAATAATTGCCAATGATTAGGGGAACTGAACCACCCCAAGCTATGTCACCTTT 40256121
Query 474446 ACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTT 474505
||| | || || | || | |||||||| || | |||| ||| |||||
Sbjct 40256122 ACTAATACCAAATGATTGATCAGTGATGCTGCAAAGAACCAAGTCGCAATGAATCCCACC 40256181
Query 474506 AATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAA 474565
|| || |||||||||| ||| | | ||||| | | ||| ||||| | | |||||
Sbjct 40256182 AACACAGTTTTTGATGCCAAACAACTTATTGGATGAAGATTTAATGATGCTGTTATCCAA 40256241
Query 474566 TCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA 474625
||||||||| |||||||| || | ||| | |||| || ||| | || | | ||
Sbjct 40256242 TCTGATATGAAACATTGGCCCTTCATGGTTGTGAATGATGCTGGCAGGCCTAAGGTTCAA 40256301
Query 474626 G--CAATACACGCAGGTGAAACTAAACAATTTTCA-CCGGAACAAATTTCTTCAATGGTT 474682
| |||||| | || || || ||| | |||| | || || | | || || |||||
Sbjct 40256302 GTAGAATACAAG--GGAGAGAC-AAAGAGTTTTTATCCAGAGGAGGTGTCATCCATGGTC 40256358
Query 474683 TTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGT 474741
| |||| ||||| ||| ||| | | ||||| |||| || || |||| ||
Sbjct 40256359 CTGACCAAGATGAAGGAAATCGCAGAAGCCTGCCTTGG-GAAGACTGTTACCAATGCTGT 40256417
Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801
| | || || || || |||||||| | ||| ||||| || || |||||||| ||||
Sbjct 40256418 TGTCATAGTACCTGCTTACTTTAATGACTGTCAGCGTCAGGCTACCAAAGATGCTGGAAC 40256477
Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861
||||| | || | ||| | | || || | ||||||||| || | || ||| ||
Sbjct 40256478 CATTGC-TGCCTCAGTGTACTTAGAATCATCAGTGAACCAACTGCTGTTGCTACTGCCTA 40256536
Query 474862 TGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGGT 474919
||| | || || || || ||| |||||| | |||||||||| || |||
Sbjct 40256537 TGGCTTAGACAAAAAGGTTGGAGCAGAGAGAAATGTGCTGATCTTTGATTTGGGTGGT 40256594
Score = 107 bits (118), Expect = 1e-17
Identities = 339/516 (66%), Gaps = 11/516 (2%)
Strand=Plus/Plus
Query 475670 GATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGA 475729
||| |||| || ||||| || || |||| || ||||| | || || || ||||| |
Sbjct 40256929 GATGCTAAGCTGGACAAGTCCCAGATCCACGATATTGTCTTGGTTGGTGGCTCAACCCGC 40256988
Query 475730 ATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAG 475788
|| || || || |||||| | || | | || ||||| ||| | |||||| | ||
Sbjct 40256989 ATCCCCAAGATT-GAGAAACTTCTCCAAGACTTCTTCAATGGGAAAGAATTAAATAAGAG 40257047
Query 475789 TGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGG 475848
| || || | ||| ||| |||||| ||| || |||||||| | ||| |||| || ||
Sbjct 40257048 CATCAACCCCGGTGAGGCTCTTGCATGTGGTGCAGCTGTCCAGGTAGCCATTTCGTCTGG 40257107
Query 475849 TCAATCAGACGAGAAACTAAATAATA-TTGTACTTGTTG-ACGTAACTCCACTTTCATTA 475906
| || | |||| | || | ||| ||||| | || ||||| ||| | |
Sbjct 40257108 AGA--CAAATCTGAAAATGTTCAAGACTTGCTGCTGTTGGATGTCACTCCTCTTCCCCTT 40257165
Query 475907 GGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCA 475966
|| ||||||| | || || | |||||| || | ||| || | | || ||
Sbjct 40257166 GGAATTGAAACTGCCGGTGGTGTCATGACTGTCCTCAAGCACA---ATGCCACCATTCC- 40257221
Query 475967 TGCAAAAAATCAAAAGTATTTT-CCACTTATTCTGATAATCAAACAACTGTAACCATCCA 476025
| |||| | || ||| |||| || ||||| || || | |||| ||| |
Sbjct 40257222 TACAAAGCAGACGCAGACTTTCACCACCTACTCTGACAAGCAGCCTGGTGTACTCATTGA 40257281
Query 476026 AATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCT 476085
| | || |||||| ||| | || || ||||| ||| | ||| | | | | ||
Sbjct 40257282 GGTTTATGTAGGTGAGCGAACCATGACCAAGGATAACAACTTGCCTGGCAAGTGTGAACT 40257341
Query 476086 TGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGA 476145
||| || |||||||| || | || |||||||| |||||||| ||||||||||||||
Sbjct 40257342 CACAGGCATACCTCCTGCCCCACGTGGTGTTCCTCAGATTGAAGTCACTTTTGATATTGA 40257401
Query 476146 TGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181
||| ||||| ||||| ||||| ||||| |||||
Sbjct 40257402 TGCCAATGGCATTCTCAATGTCTCTGCTGTGGATAA 40257437
>seq1410
Length=27214
Score = 111 bits (122), Expect = 1e-18
Identities = 351/532 (66%), Gaps = 31/532 (6%)
Strand=Plus/Plus
Query 355009 AGGAATGCTTTATAATCATCAGTCCAAGTACCTATTGGTAAATCCGTAATA-TGAATAGT 355067
|||||| || ||||||||| | |||| || ||||||||| || || || | ||| |
Sbjct 9094 AGGAATTCTCTATAATCATTAATCCATCTATTTATTGGTAATTCTGTTATTGTTAATTTT 9153
Query 355068 GTCATTTCCT---ATAATTTCATATTT---AGCT-CTTGAAATA-TATTTATTATTATCT 355119
|||| || | ||||||| ||||| | || | | |||| || || ||||||
Sbjct 9154 TTCATATCATCTGATAATTT-ATATTGTCCAACTACATCAAATCCTAATT--TATTAT-- 9208
Query 355120 ATTTTTTCTACTGTTCCTGTAAAATGACGATACCAAGGTTTCATTG-----ATCTTGGTT 355174
|| |||| | ||||||| |||| |||||| ||| ||| || | |
Sbjct 9209 -TTCTTTCAATTGTTCCTTTAAATCCTTTATACCATGGTACCATYTCAAACATTTCTCTA 9267
Query 355175 TTTGGTCATTAAGTATTCTAATAATATTTTCATGAATGTCTCTTGGATTACATGGTGGAA 355234
||| || | ||| | || ||||| || | ||| |||| ||| | || |
Sbjct 9268 TTTTGTAAATAATTTTTT-----ATATTCTCTATTACATCTATTGGGTTATAACAAGGTA 9322
Query 355235 CATTTGTTGAATATCCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTA 355294
||||||| | | || || ||||||||||||| || ||||| || | |||||| ||||
Sbjct 9323 CATTTGTACTAAAACCTGTTCCAATACCTTCTGAACCGTTAACCAACACCATTGGTATTA 9382
Query 355295 CAGGTACATAAAATACTGGTTCAATCATTTTATTATCTTCAAATTGATGTTGCAATACAT 355354
|||| |||| | | |||||||| ||| | | |||||| || | | ||| | |
Sbjct 9383 TTGGTAAATAATAAAATGGTTCAACCATCTGACCTTCTTCATTCTGGTAAT-CAAGAATT 9441
Query 355355 -CAAAATCATGTTGTATGAAAATATATTTAGTTAAT--TGATTGAGTTGTGTGAAGATAT 355411
| ||||| ||||| || | |||| | |||| | |||| | || ||| || ||||
Sbjct 9442 GGATCATCATCTTGTAAAAATACATATCTTGTTAGTGGTGAT--AATTTTGTAAATATAT 9499
Query 355412 ATCGTGCACTTGCATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAA 355471
| ||||| ||| ||| || ||||| | ||| | ||||| |||||| || |
Sbjct 9500 AACGTGCTGCTGCTGCATCCTTTCCTCCTTCTTTTCTACTTCCAAACTGACCACATGGTA 9559
Query 355472 GTAATAAATTTATGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTAT 355523
|||||||||| ||| || || ||| ||| ||||||||| ||||| ||
Sbjct 9560 ACAATAAATTTAAGTTATTTGAACCTACAAAATCTTGTGCCATATTTATAAT 9611
>seq796
Length=19338
Score = 105 bits (116), Expect = 4e-17
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 318604 ATTAAATATATTTTTTGCTCAACTTGACTTTCTGTATTAATACCATTATCACCATAAACA 318663
||||||| ||| | ||| || || | ||||| || |||| || ||||| | |
Sbjct 19143 ATTAAATCTATATATTGATCTTCTATATATTCTGCTCCCATTCCATCTTCTCCATATAAA 19084
Query 318664 CATTGAATCAATTTATCATTAGCATTTCTTACAGTACCATCATATTCCACTTTAATATCT 318723
|||| | | | |||| |||||||| | || | |||||||| || | | ||||
Sbjct 19083 AATTGTAGTATCTCTCCATTTCCATTTCTTGCTGTTCTATCATATTGTACCATTACATCT 19024
Query 318724 TCTAGTATTTTAACTAATTTTCTTTGTACATAACCTGTGTCTGCAGTTTTAATAGCAGTA 318783
|| | | ||| | |||| ||||||||||||| ||||| || ||||||| ||| |||
Sbjct 19023 TCCATTGCTTTCATTAATCTTCTTTGTACATATCCTGTTTCGCTAGTTTTACAAGCTGTA 18964
Query 318784 TTAATAATACCTTCTCTTCCTGCCATAACTTGGAAAAA 318821
| |||||||||||||| ||| |||| | ||||||||
Sbjct 18963 TCTATAATACCTTCTCTACCTCCCATTGCGTGGAAAAA 18926
>seq2706
Length=15016
Score = 104 bits (114), Expect = 2e-16
Identities = 136/186 (73%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 318689 TTCTTACAGTACCATCATATTCCACTTTAATATCTTCTAGTATTTTAACTAATTTTCTTT 318748
|||||||| || |||||| | | |||||||| | | ||| | || | ||||||
Sbjct 804 TTCTTACACTATGATCATAACATATTGCTATATCTTCCATAAATTTCATTATTCTTCTTT 745
Query 318749 GTACATAACCTGTGTCTGCAGTTTTAATAGCAGTAT-TAATAATACCTTCTCTTCCTGCC 318807
| | ||| ||||| |||| ||||| | || |||| || |||| |||||||| |||| |
Sbjct 744 GCATATATCCTGTTTCTGATGTTTTTACTGCTGTATCTATTAAT-CCTTCTCTACCTGAC 686
Query 318808 ATAACTTGGAAAAAGAATTCAGCAGGTCCTAAACCTTTAATAAATGAACTTGGACAAAAA 318867
||| |||||||||||||| | ||| |||| ||| ||| ||||||| ||| |||
Sbjct 685 ATAGTATGGAAAAAGAATTCTTCTGGTTCTAATCCTGTAAAAAATGAATTTGCTACAAAT 626
Query 318868 CCTCTA 318873
||||||
Sbjct 625 CCTCTA 620
>seq5647
Length=2712
Score = 100 bits (110), Expect = 2e-15
Identities = 172/250 (69%), Gaps = 6/250 (2%)
Strand=Plus/Minus
Query 297323 TTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTG 297382
|||| |||||||||| |||| || | |||||||| || | || || || || ||||
Sbjct 254 TTTTTGATTGTTGGTATGAAAGTGGATGTATGCCTTTTGCAAAGATACACTACCCATTTG 195
Query 297383 AAAATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAA 297442
||||| || | ||| || | | ||| ||| |||||||| | || |
Sbjct 194 AAAATAAGGATAATTTCGATAACT------ATTTCCCAGCAAATTTTATAGCTGAGGGAC 141
Query 297443 TTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACA 297502
| ||||| ||||| |||||||||||||| || || |||||||| | ||||| |
Sbjct 140 TGGATCAGACAAGGGGTTGGTTTTATACATTGACTGTAATTTCTACACATTTATTTGGTA 81
Query 297503 AACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAA 297562
|| | | ||||||||||| ||||||| ||| |||| ||| ||||| | || |
Sbjct 80 AAGTACCTTTTAAAAATGTTATTGTTAATGGACTTGTGTTGGCAAGCGATGGGAAGAAGA 21
Query 297563 TGTCAAAAAG 297572
||||||||||
Sbjct 20 TGTCAAAAAG 11
>seq24
Length=78163535
Score = 100 bits (110), Expect = 2e-15
Identities = 114/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
|||||| |||||||| |||||||| || || | ||| || ||||||||||||||||||||
Sbjct 22107692 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTT 22107751
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
|| || ||||| || ||| ||| || ||||| | | || || || || ||
Sbjct 22107752 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGAT 22107811
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || || ||||| |||||||||||
Sbjct 22107812 GGTCTTCCCCGTCAGGGTCTTCACGAAAATTTG 22107844
>seq11
Length=140388259
Score = 87.8 bits (96), Expect = 1e-11
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 474728 GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACT 474787
|| ||| ||||||| ||||||| ||||||||||| |||||| | ||||| || |||||
Sbjct 15221242 GTTACTCATGCAGTTGTTACTGTACCAGCATATTTCAATGATGCCCAACGCCAGGCAACC 15221301
Query 474788 AAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACC 474840
|||||||| |||| ||||| || | ||||| | | || || ||||| ||
Sbjct 15221302 AAAGATGCTGGAACTATTGCTGGATTGAATGTCATGAGGATCATCAATGAGCC 15221354
>seq5
Length=178027732
Score = 87.8 bits (96), Expect = 1e-11
Identities = 114/156 (73%), Gaps = 4/156 (3%)
Strand=Plus/Plus
Query 480616 TATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCT 480675
||||||| |||||||| |||||||| || || | ||| || |||||||||||||||||||
Sbjct 42512368 TATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCT 42512427
Query 480676 TGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC--AGTGTGTGAAGTTTCAAGGGT 480733
| || || ||||| || ||| ||| || |||| || | ||| || || ||
Sbjct 42512428 TATCCTGGATCTTGGCCTTTACATTTTCTATGCTATCCGAGGGCTTGA--CCTCGAGAGT 42512485
Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || || || ||| | |||||||| ||
Sbjct 42512486 GATGGTCTTCCCCGTCAGGGTCGTCACGAAAATCTG 42512521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3267686809993892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |