Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017 -06-19] 11,479 sequences; 3,438,623,608 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1731 170 1e-36 seq491 167 2e-35 seq426 134 9e-26 seq6841 129 4e-24 seq6 113 3e-19 seq1410 111 1e-18 seq796 105 4e-17 seq2706 104 2e-16 seq5647 100 2e-15 seq24 100 2e-15 seq11 87.8 1e-11 seq5 87.8 1e-11 >seq1731 Length=14715 Score = 170 bits (188), Expect = 1e-36 Identities = 284/397 (72%), Gaps = 10/397 (3%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || ||||||||||||||||||||||| ||||| ||||| || |||||||| || ||| Sbjct 4246 AACCCAGATGAAGCTGTTGCATATGGAGCAGCTGTACAAGCTGCCATTTTATCTGG-CAA 4304 Query 475853 TCAGACGAGAAACTAAATAATA-TTGTACTTGTTG-ACGTAACTCCACTTTCATTAGGTC 475910 || | ||||| | || | ||| ||||||| | || ||||| | ||| | || Sbjct 4305 CCAATC-AGAAAAGATTCAAGAGTTGCTCTTGTTGGATGTCGCTCCATTGTCACTTGGAT 4363 Query 475911 TTGAAACAGTTGGAGGGATTATGACTAATCTT-ATTGACAGAAATACTCCTATCCCATGC 475969 | || |||| ||| || ||||||| | | || ||| | |||||||| | || ||| | Sbjct 4364 TAGAGACAGCTGGTGGTGTTATGAC-AGTGTTGATTAAAAGAAATACAACAATACCAACC 4422 Query 475970 AA-AAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 || |||| | ||| | ||| | || | ||| ||| | ||| || ||| | Sbjct 4423 AAGAAAAACCAAA-TCTTTACAACAAACGAAGATCGCCAAGAAGGTGTGTTGATTCAAGT 4481 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGA 476088 |||||||| |||||| | | || |||||||| ||| ||| |||| || | ||||| Sbjct 4482 ATTTGAAGGAGAAAGAGCAATGACAAAAGATAACAACCTACTAGGAAAGTTCCA-CTTGA 4540 Query 476089 A-GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATG 476147 || || | || || || |||||||| || ||||| || ||||| ||||||||||||| Sbjct 4541 GTGGAATAGCACCAGCACCAAGAGGAGTACCACAAATCGAGGTTACATTTGATATTGATG 4600 Query 476148 CAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 |||||||||| | || || |||||| |||||||| Sbjct 4601 CAAATGGTATCTTGAACGTCACTGCTATGGATAAATC 4637 Score = 143 bits (158), Expect = 2e-28 Identities = 195/272 (72%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||| ||||| || || || || ||| ||||| || || | || || || Sbjct 6203 GCTATTGGAATTGACTTGGGTACAACCTACTCATGTGTTGCAGTATACAAAGATAACAAC 6262 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| ||| ||||||| |||||||| ||||||||||| || |||||| | || ||| Sbjct 6263 GTCGAAATTATTCCCAATGATCAAGGTAACAGAACAACACCTTCTTATGTTGCATTCACT 6322 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || ||| | ||||| ||||| ||||| |||| | || ||| || | || Sbjct 6323 GATACCGAAAGGTTGATTGGTGATGCCGCTAAGAATCAGGAAGCCCGTAACCCAGAAAAC 6382 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || ||||| || || |||||| | ||||| | || || ||||| | ||||| ||| Sbjct 6383 ACAATTTTCGACGCCAAAAGACTTATTGGAAGGAAGTTCGATGACAGAACTGTTCAAGAA 6442 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAA 474600 |||||| |||||||| |||||||| | ||| Sbjct 6443 GATATGAAACATTGGCCATTTAAGGTTACAAA 6474 >seq491 Length=27848 Score = 167 bits (184), Expect = 2e-35 Identities = 253/357 (71%), Gaps = 5/357 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||| ||||| || || || || ||| ||||| || || | || | || Sbjct 26975 GCTATTGGAATTGACTTGGGTACAACATACTCATGTGTTGCAGTATACAAAGACAACAAC 26916 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| ||| ||||||| |||||||| ||||||||||| || |||||| | |||||| Sbjct 26915 GTCGAAATTATTCCCAATGATCAAGGTAACAGAACAACACCTTCTTATGTTGCATTTACT 26856 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || ||| | ||||| ||||| |||||| | || | ||| ||| || | || Sbjct 26855 GATACCGAAAGATTAATTGGTGATGCAGCTAAAAACCAGGAAGCACGTAACCCAGAAAAC 26796 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || ||||||||||| |||||| | ||||| | || || ||||| | ||||| || Sbjct 26795 ACAATTTTTGATGCCAAAAGACTTATTGGAAGGAAATTCGATGACAGAACTGTTCAGGAA 26736 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATG---TTGGTGGTAAACCATATATAGAA 474625 |||||| |||||||| |||||||| | ||||| | ||||||||| |||| ||| Sbjct 26735 GATATGAAACATTGGCCATTTAAGGTTACAAATGGACCAAGCGGTAAACCAAATATCGAA 26676 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCAC-CGGAACAAATTTCTTCAATGGT 474681 | | | | |||||||| || | || ||| | || ||||||| || ||||| Sbjct 26675 GTTACATTCCAAGGTGAAA-AGAAGACCTTCCACGCAGAGGAAATTTCCTCTATGGT 26620 >seq426 Length=37308 Score = 134 bits (148), Expect = 9e-26 Identities = 195/274 (71%), Gaps = 10/274 (4%) Strand=Plus/Minus Query 297323 TTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTG 297382 |||| |||||||||| |||| || |||||||||| | | || || || || |||| Sbjct 18500 TTTTTGATTGTTGGTATGAAAGTGGATCTATGCCTTTAGCAAAGATACACTACCCATTTG 18441 Query 297383 AAAATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAA 297442 ||||| || | |||||| | | || | ||| |||||||| | ||| Sbjct 18440 AAAATAAGGATAATTTAGATAAGTT------TTTTCCGGCAAATTTTATAGCTGAAGGGT 18387 Query 297443 TTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACA 297502 | ||||| ||||| |||||||||||||| || ||| |||||||| | ||||| | Sbjct 18386 TAGATCAGACAAGGGGTTGGTTTTATACATTGACAGTAATTTCTACACATTTATTTGGTA 18327 Query 297503 AACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAA 297562 || | | ||||||||||| ||||||| ||| |||| ||||||||||| |||| | Sbjct 18326 AAGTACCTTTTAAAAATGTTATTGTTAATGGACTTGTGTTGGCAGCTGATGGGAAAAAGA 18267 Query 297563 TGTCAAAAAG--TAAAGGTAATTATCCTGATCCA 297594 |||||||||| | ||| ||||| || |||||| Sbjct 18266 TGTCAAAAAGACTTAAG--AATTACCCAGATCCA 18235 >seq6841 Length=1464 Score = 129 bits (142), Expect = 4e-24 Identities = 112/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 ||| | ||||| ||||||||||||||||||||||| || ||||| | ||||| ||||| Sbjct 782 GCAATTATTACAGTTCCAGCATATTTTAATGATTCCCAGCGTCAGTCTACTAAGGATGCT 723 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 || | || || |||||| ||||| | | ||||| || |||||||||||||| || || Sbjct 722 GGTACCATCGCTGGTCTTGATGTTATTAGAATTATCAACGAACCAACAGCAGCAGCTATT 663 Query 474857 GCTTATGGTCTTGATAAGA 474875 || |||||| ||||||||| Sbjct 662 GCATATGGTATTGATAAGA 644 Score = 93.3 bits (102), Expect = 3e-13 Identities = 258/389 (66%), Gaps = 20/389 (5%) Strand=Plus/Minus Query 475539 AAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAAT-ACTCTTATTACA 475597 |||||||| ||||| |||| | | |||| |||| || | | || | | | | ||| Sbjct 373 AAACTACTCTTGAAATTGAAGATTTACTTGATGGAAAGGACTTTCATGAAACAT-TAACA 315 Query 475598 AGGGCTAAATTTGAAGATATTTG--TTCTGATCTCTTTAGAAAAACAATTGAACCCGTTG 475655 || || || |||||| | ||| | ||||| ||| ||||| || || | ||| Sbjct 314 AGAGCAAAGTTTGAA--TCATTGAATGAAGATCTATTTGAGAAAACTATGGATACTGTTA 257 Query 475656 AACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAG 475715 || ||| |||| ||| ||| | | |||||| | | || | |||||||| |||| Sbjct 256 AAGCAGTACTCAAAGAAGCTAGAATGTCTAAATCAGATATTAATCAGATTGTTCTAGTAG 197 Query 475716 GAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAA 475775 |||| ||||| ||||| || ||| | ||||| ||| | |||||| || ||| Sbjct 196 GAGGATCAACCAGAATACCTAAAGTTAGAGAGATGATCAAGGAATATTTCAAC---AAAG 140 Query 475776 AGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAG 475835 | | ||| || | ||| | |||||||| || ||||| ||||| || | |||| || Sbjct 139 ACCCAGATGTTAGCATTAATGCAGATGAAGCAGTAGCATACGGAGCAGCAATGCAAGGAG 80 Query 475836 CTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTG-ACGTAACT 475894 ||| || |||| ||||| || || | | || ||||||| | ||| | Sbjct 79 GTATATTGACAGGAGAATCAT--------CTCAAGATT--TGCTCTTGTTGGATGTATGT 30 Query 475895 CCACTTTCATTAGGTCTTGAAACAGTTGG 475923 ||||||||||| ||| | || |||||||| Sbjct 29 CCACTTTCATTGGGTATAGAGACAGTTGG 1 Score = 91.5 bits (100), Expect = 1e-12 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 290823 CAAGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGAC 290882 ||| |||||||| | | |||||||||||||| || |||||||| | |||||||||| Sbjct 650 CAATACCATATGCAATAGCTGCTGCTGTTGGTTCGTTGATAATTCTAATAACATCAAGAC 709 Query 290883 CTGCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGA 290942 | || || | | | ||| ||| | ||| || || | |||||||||||| || || | Sbjct 710 CAGCGATGGTACCAGCATCCTTAGTAGACTGACGCTGGGAATCATTAAAATATGCTGGAA 769 Query 290943 CTGTAATAACAGCTTTTT 290960 ||||||||| || |||| Sbjct 770 CTGTAATAATTGCCTTTT 787 >seq6 Length=73112236 Score = 113 bits (124), Expect = 3e-19 Identities = 353/538 (66%), Gaps = 9/538 (2%) Strand=Plus/Plus Query 474386 AAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTT 474445 || || ||||||||||||||||| | || || |||| || ||| ||||| | ||| Sbjct 40256062 AAGGTGGAAATAATTGCCAATGATTAGGGGAACTGAACCACCCCAAGCTATGTCACCTTT 40256121 Query 474446 ACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTT 474505 ||| | || || | || | |||||||| || | |||| ||| ||||| Sbjct 40256122 ACTAATACCAAATGATTGATCAGTGATGCTGCAAAGAACCAAGTCGCAATGAATCCCACC 40256181 Query 474506 AATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAA 474565 || || |||||||||| ||| | | ||||| | | ||| ||||| | | ||||| Sbjct 40256182 AACACAGTTTTTGATGCCAAACAACTTATTGGATGAAGATTTAATGATGCTGTTATCCAA 40256241 Query 474566 TCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA 474625 ||||||||| |||||||| || | ||| | |||| || ||| | || | | || Sbjct 40256242 TCTGATATGAAACATTGGCCCTTCATGGTTGTGAATGATGCTGGCAGGCCTAAGGTTCAA 40256301 Query 474626 G--CAATACACGCAGGTGAAACTAAACAATTTTCA-CCGGAACAAATTTCTTCAATGGTT 474682 | |||||| | || || || ||| | |||| | || || | | || || ||||| Sbjct 40256302 GTAGAATACAAG--GGAGAGAC-AAAGAGTTTTTATCCAGAGGAGGTGTCATCCATGGTC 40256358 Query 474683 TTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGT 474741 | |||| ||||| ||| ||| | | ||||| |||| || || |||| || Sbjct 40256359 CTGACCAAGATGAAGGAAATCGCAGAAGCCTGCCTTGG-GAAGACTGTTACCAATGCTGT 40256417 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 | | || || || || |||||||| | ||| ||||| || || |||||||| |||| Sbjct 40256418 TGTCATAGTACCTGCTTACTTTAATGACTGTCAGCGTCAGGCTACCAAAGATGCTGGAAC 40256477 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 ||||| | || | ||| | | || || | ||||||||| || | || ||| || Sbjct 40256478 CATTGC-TGCCTCAGTGTACTTAGAATCATCAGTGAACCAACTGCTGTTGCTACTGCCTA 40256536 Query 474862 TGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGGT 474919 ||| | || || || || ||| |||||| | |||||||||| || ||| Sbjct 40256537 TGGCTTAGACAAAAAGGTTGGAGCAGAGAGAAATGTGCTGATCTTTGATTTGGGTGGT 40256594 Score = 107 bits (118), Expect = 1e-17 Identities = 339/516 (66%), Gaps = 11/516 (2%) Strand=Plus/Plus Query 475670 GATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGA 475729 ||| |||| || ||||| || || |||| || ||||| | || || || ||||| | Sbjct 40256929 GATGCTAAGCTGGACAAGTCCCAGATCCACGATATTGTCTTGGTTGGTGGCTCAACCCGC 40256988 Query 475730 ATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAG 475788 || || || || |||||| | || | | || ||||| ||| | |||||| | || Sbjct 40256989 ATCCCCAAGATT-GAGAAACTTCTCCAAGACTTCTTCAATGGGAAAGAATTAAATAAGAG 40257047 Query 475789 TGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGG 475848 | || || | ||| ||| |||||| ||| || |||||||| | ||| |||| || || Sbjct 40257048 CATCAACCCCGGTGAGGCTCTTGCATGTGGTGCAGCTGTCCAGGTAGCCATTTCGTCTGG 40257107 Query 475849 TCAATCAGACGAGAAACTAAATAATA-TTGTACTTGTTG-ACGTAACTCCACTTTCATTA 475906 | || | |||| | || | ||| ||||| | || ||||| ||| | | Sbjct 40257108 AGA--CAAATCTGAAAATGTTCAAGACTTGCTGCTGTTGGATGTCACTCCTCTTCCCCTT 40257165 Query 475907 GGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCA 475966 || ||||||| | || || | |||||| || | ||| || | | || || Sbjct 40257166 GGAATTGAAACTGCCGGTGGTGTCATGACTGTCCTCAAGCACA---ATGCCACCATTCC- 40257221 Query 475967 TGCAAAAAATCAAAAGTATTTT-CCACTTATTCTGATAATCAAACAACTGTAACCATCCA 476025 | |||| | || ||| |||| || ||||| || || | |||| ||| | Sbjct 40257222 TACAAAGCAGACGCAGACTTTCACCACCTACTCTGACAAGCAGCCTGGTGTACTCATTGA 40257281 Query 476026 AATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCT 476085 | | || |||||| ||| | || || ||||| ||| | ||| | | | | || Sbjct 40257282 GGTTTATGTAGGTGAGCGAACCATGACCAAGGATAACAACTTGCCTGGCAAGTGTGAACT 40257341 Query 476086 TGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGA 476145 ||| || |||||||| || | || |||||||| |||||||| |||||||||||||| Sbjct 40257342 CACAGGCATACCTCCTGCCCCACGTGGTGTTCCTCAGATTGAAGTCACTTTTGATATTGA 40257401 Query 476146 TGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||| ||||| ||||| ||||| ||||| ||||| Sbjct 40257402 TGCCAATGGCATTCTCAATGTCTCTGCTGTGGATAA 40257437 >seq1410 Length=27214 Score = 111 bits (122), Expect = 1e-18 Identities = 351/532 (66%), Gaps = 31/532 (6%) Strand=Plus/Plus Query 355009 AGGAATGCTTTATAATCATCAGTCCAAGTACCTATTGGTAAATCCGTAATA-TGAATAGT 355067 |||||| || ||||||||| | |||| || ||||||||| || || || | ||| | Sbjct 9094 AGGAATTCTCTATAATCATTAATCCATCTATTTATTGGTAATTCTGTTATTGTTAATTTT 9153 Query 355068 GTCATTTCCT---ATAATTTCATATTT---AGCT-CTTGAAATA-TATTTATTATTATCT 355119 |||| || | ||||||| ||||| | || | | |||| || || |||||| Sbjct 9154 TTCATATCATCTGATAATTT-ATATTGTCCAACTACATCAAATCCTAATT--TATTAT-- 9208 Query 355120 ATTTTTTCTACTGTTCCTGTAAAATGACGATACCAAGGTTTCATTG-----ATCTTGGTT 355174 || |||| | ||||||| |||| |||||| ||| ||| || | | Sbjct 9209 -TTCTTTCAATTGTTCCTTTAAATCCTTTATACCATGGTACCATYTCAAACATTTCTCTA 9267 Query 355175 TTTGGTCATTAAGTATTCTAATAATATTTTCATGAATGTCTCTTGGATTACATGGTGGAA 355234 ||| || | ||| | || ||||| || | ||| |||| ||| | || | Sbjct 9268 TTTTGTAAATAATTTTTT-----ATATTCTCTATTACATCTATTGGGTTATAACAAGGTA 9322 Query 355235 CATTTGTTGAATATCCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTA 355294 ||||||| | | || || ||||||||||||| || ||||| || | |||||| |||| Sbjct 9323 CATTTGTACTAAAACCTGTTCCAATACCTTCTGAACCGTTAACCAACACCATTGGTATTA 9382 Query 355295 CAGGTACATAAAATACTGGTTCAATCATTTTATTATCTTCAAATTGATGTTGCAATACAT 355354 |||| |||| | | |||||||| ||| | | |||||| || | | ||| | | Sbjct 9383 TTGGTAAATAATAAAATGGTTCAACCATCTGACCTTCTTCATTCTGGTAAT-CAAGAATT 9441 Query 355355 -CAAAATCATGTTGTATGAAAATATATTTAGTTAAT--TGATTGAGTTGTGTGAAGATAT 355411 | ||||| ||||| || | |||| | |||| | |||| | || ||| || |||| Sbjct 9442 GGATCATCATCTTGTAAAAATACATATCTTGTTAGTGGTGAT--AATTTTGTAAATATAT 9499 Query 355412 ATCGTGCACTTGCATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAA 355471 | ||||| ||| ||| || ||||| | ||| | ||||| |||||| || | Sbjct 9500 AACGTGCTGCTGCTGCATCCTTTCCTCCTTCTTTTCTACTTCCAAACTGACCACATGGTA 9559 Query 355472 GTAATAAATTTATGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTAT 355523 |||||||||| ||| || || ||| ||| ||||||||| ||||| || Sbjct 9560 ACAATAAATTTAAGTTATTTGAACCTACAAAATCTTGTGCCATATTTATAAT 9611 >seq796 Length=19338 Score = 105 bits (116), Expect = 4e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 318604 ATTAAATATATTTTTTGCTCAACTTGACTTTCTGTATTAATACCATTATCACCATAAACA 318663 ||||||| ||| | ||| || || | ||||| || |||| || ||||| | | Sbjct 19143 ATTAAATCTATATATTGATCTTCTATATATTCTGCTCCCATTCCATCTTCTCCATATAAA 19084 Query 318664 CATTGAATCAATTTATCATTAGCATTTCTTACAGTACCATCATATTCCACTTTAATATCT 318723 |||| | | | |||| |||||||| | || | |||||||| || | | |||| Sbjct 19083 AATTGTAGTATCTCTCCATTTCCATTTCTTGCTGTTCTATCATATTGTACCATTACATCT 19024 Query 318724 TCTAGTATTTTAACTAATTTTCTTTGTACATAACCTGTGTCTGCAGTTTTAATAGCAGTA 318783 || | | ||| | |||| ||||||||||||| ||||| || ||||||| ||| ||| Sbjct 19023 TCCATTGCTTTCATTAATCTTCTTTGTACATATCCTGTTTCGCTAGTTTTACAAGCTGTA 18964 Query 318784 TTAATAATACCTTCTCTTCCTGCCATAACTTGGAAAAA 318821 | |||||||||||||| ||| |||| | |||||||| Sbjct 18963 TCTATAATACCTTCTCTACCTCCCATTGCGTGGAAAAA 18926 >seq2706 Length=15016 Score = 104 bits (114), Expect = 2e-16 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 318689 TTCTTACAGTACCATCATATTCCACTTTAATATCTTCTAGTATTTTAACTAATTTTCTTT 318748 |||||||| || |||||| | | |||||||| | | ||| | || | |||||| Sbjct 804 TTCTTACACTATGATCATAACATATTGCTATATCTTCCATAAATTTCATTATTCTTCTTT 745 Query 318749 GTACATAACCTGTGTCTGCAGTTTTAATAGCAGTAT-TAATAATACCTTCTCTTCCTGCC 318807 | | ||| ||||| |||| ||||| | || |||| || |||| |||||||| |||| | Sbjct 744 GCATATATCCTGTTTCTGATGTTTTTACTGCTGTATCTATTAAT-CCTTCTCTACCTGAC 686 Query 318808 ATAACTTGGAAAAAGAATTCAGCAGGTCCTAAACCTTTAATAAATGAACTTGGACAAAAA 318867 ||| |||||||||||||| | ||| |||| ||| ||| ||||||| ||| ||| Sbjct 685 ATAGTATGGAAAAAGAATTCTTCTGGTTCTAATCCTGTAAAAAATGAATTTGCTACAAAT 626 Query 318868 CCTCTA 318873 |||||| Sbjct 625 CCTCTA 620 >seq5647 Length=2712 Score = 100 bits (110), Expect = 2e-15 Identities = 172/250 (69%), Gaps = 6/250 (2%) Strand=Plus/Minus Query 297323 TTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTG 297382 |||| |||||||||| |||| || | |||||||| || | || || || || |||| Sbjct 254 TTTTTGATTGTTGGTATGAAAGTGGATGTATGCCTTTTGCAAAGATACACTACCCATTTG 195 Query 297383 AAAATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAA 297442 ||||| || | ||| || | | ||| ||| |||||||| | || | Sbjct 194 AAAATAAGGATAATTTCGATAACT------ATTTCCCAGCAAATTTTATAGCTGAGGGAC 141 Query 297443 TTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACA 297502 | ||||| ||||| |||||||||||||| || || |||||||| | ||||| | Sbjct 140 TGGATCAGACAAGGGGTTGGTTTTATACATTGACTGTAATTTCTACACATTTATTTGGTA 81 Query 297503 AACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAA 297562 || | | ||||||||||| ||||||| ||| |||| ||| ||||| | || | Sbjct 80 AAGTACCTTTTAAAAATGTTATTGTTAATGGACTTGTGTTGGCAAGCGATGGGAAGAAGA 21 Query 297563 TGTCAAAAAG 297572 |||||||||| Sbjct 20 TGTCAAAAAG 11 >seq24 Length=78163535 Score = 100 bits (110), Expect = 2e-15 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || || | ||| || |||||||||||||||||||| Sbjct 22107692 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTT 22107751 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 || || ||||| || ||| ||| || ||||| | | || || || || || Sbjct 22107752 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGAT 22107811 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| ||||||||||| Sbjct 22107812 GGTCTTCCCCGTCAGGGTCTTCACGAAAATTTG 22107844 >seq11 Length=140388259 Score = 87.8 bits (96), Expect = 1e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 474728 GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACT 474787 || ||| ||||||| ||||||| ||||||||||| |||||| | ||||| || ||||| Sbjct 15221242 GTTACTCATGCAGTTGTTACTGTACCAGCATATTTCAATGATGCCCAACGCCAGGCAACC 15221301 Query 474788 AAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACC 474840 |||||||| |||| ||||| || | ||||| | | || || ||||| || Sbjct 15221302 AAAGATGCTGGAACTATTGCTGGATTGAATGTCATGAGGATCATCAATGAGCC 15221354 >seq5 Length=178027732 Score = 87.8 bits (96), Expect = 1e-11 Identities = 114/156 (73%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 480616 TATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCT 480675 ||||||| |||||||| |||||||| || || | ||| || ||||||||||||||||||| Sbjct 42512368 TATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCT 42512427 Query 480676 TGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC--AGTGTGTGAAGTTTCAAGGGT 480733 | || || ||||| || ||| ||| || |||| || | ||| || || || Sbjct 42512428 TATCCTGGATCTTGGCCTTTACATTTTCTATGCTATCCGAGGGCTTGA--CCTCGAGAGT 42512485 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || ||| | |||||||| || Sbjct 42512486 GATGGTCTTCCCCGTCAGGGTCGTCACGAAAATCTG 42512521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267686809993892