Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017
-06-19] 11,479 sequences; 3,438,623,608 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq2050 109 1e-18
>seq2050
Length=9667
Score = 109 bits (120), Expect = 1e-18
Identities = 288/430 (67%), Gaps = 20/430 (5%)
Strand=Plus/Plus
Query 348667 GTAAATTTGGCATCACGTGCAAATCAAGTTTGTATCCAtttt-ttttAAGAAGACGGATA 348725
||| || |||||| | || | ||||| ||| | | ||| | |||||| || | ||
Sbjct 8309 GTAGATCTGGCATAATATGTATATCAACTTTAAAACAATTCTCTTTTAATAA-ATATATT 8367
Query 348726 GCATTTTTTGTGTGTTCTACAGTATGACCTCTATTTGATAATTTCAAAATATCATTATTC 348785
|| ||| ||| | ||||| ||||| ||||||||| ||||| || |||| ||||||
Sbjct 8368 GCTTTTATTGAATCTTCTATTGTATGTCCTCTATTTACTAATTCTAATATATTATTATTT 8427
Query 348786 GTGTGTTGTGCACCCATTTGGAGTCTTGTACAACCGTAACTTCTGAATCGCTTTATTTCT 348845
|| |||||| || | ||| | ||| ||||| || | | || ||| | |||||
Sbjct 8428 GTATGTTGTATTCCAAGTTGTACTCTAGTACATCCAAATTTCCTTAATAATTCAATTTCA 8487
Query 348846 TCTAATGTTATGGTGTCTGGTCTAGTTTCCAGAGTCAATCCAATAATTCTGATTTTTGCT 348905
| | |||| | |||||||| ||||| | || ||||| || ||||| ||| |
Sbjct 8488 TTTGGATTTATTCTATCTGGTCTGGTTTCTAATGTTAATCCTATTATTCTACATTTACTT 8547
Query 348906 GTTTCATTAAGTAGCAT-TTCCTCTTCAAGAGAAAAGCGGTCTTCAC---GTTTTGAAT- 348960
|||||||||| | || ||| | ||| | | | ||| || |||| ||
Sbjct 8548 GTTTCATTAA-TCTTATGTTCATATTCTAATGTTCCTCTTTCTCTACAATTATTTGGATC 8606
Query 348961 ------AGAAAGCATTTGCAGC--AAAATAAATGTTTCGAATAAATTCCTTCTGATAAGG 349012
| | | ||| ||||| |||||||| | || |||||||| | ||||||
Sbjct 8607 TTCTCCATATA-TATTAGCAGCATAAAATAAA--TCTCTTATAAATTCTTCTTGATAATT 8663
Query 349013 TAATGGATATTCACTCCATGTACCACCGAGTACTAGAACTTCTAATTTATCAAGTTCGTG 349072
| ||||||| |||||||||| ||||| | ||||| | ||||| |||||| | | | ||
Sbjct 8664 TCTTGGATATCCACTCCATGTTCCACCTAATACTATTATTTCTATTTTATCTATTACATG 8723
Query 349073 TCCCATTTTT 349082
| ||||||||
Sbjct 8724 T-CCATTTTT 8732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186638249878319
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |