Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017 -06-19] 11,479 sequences; 3,438,623,608 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=104504130 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 104904 AGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGA 104963 ||||||| || ||||| ||||| ||||||||||| |||||||| ||||||| | |||| Sbjct 62754139 AGTCTCAGACAGAGACAGGTACCCCATACATGCTCTACAAAGATTCCTGTAATCGGAAGA 62754080 Query 104964 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAAT 105023 | || || |||| ||||| ||||| | ||| || || |||||||| |||| | Sbjct 62754079 GCAACCAGCAGAACTTGGGAACCATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGT 62754020 Query 105024 TTACAGACAAAGATGAG 105040 ||| |||||||||| Sbjct 62754019 ATACCAGCAAAGATGAG 62754003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583177109365960