Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017 -06-19] 11,479 sequences; 3,438,623,608 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq28 93.3 5e-14 >seq28 Length=82073021 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 32674 TGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGA 32733 |||||| || ||||| |||||||| || || ||| | || || | || || || ||| Sbjct 24730127 TGTGGTGGTACTTTATATCTAAAGGAATTGAGTATTTGGACACGGTGTTTTTTATCCTGA 24730068 Query 32734 GAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTT 32793 | |||||| |||||||| ||| | ||||| || || || | ||||||||||| | Sbjct 24730067 GGAAGAAAAACAACCAAGTCTCTTTTCTTCACGTGTATCATCACTGCACCATGTTTACCT 24730008 Query 32794 TAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAGG 32832 | | ||||| || ||||| ||| | |||||||||||| Sbjct 24730007 TGTGGTGGATCGGAATTAAGTGGGTCCCAGGAGGACAGG 24729969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603094251094960