Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq23 289 2e-73
>seq23
Length=36106517
Score = 289 bits (320), Expect = 2e-73
Identities = 468/673 (70%), Gaps = 0/673 (0%)
Strand=Plus/Minus
Query 18586 TGCAAGCTCGATACAATTTGCGAAATGAATTTCCTCTTTTAACTACAAAGCGTGTTTTTT 18645
|||| || || |||| || || ||||||||||||| | || || || |||||||| |
Sbjct 32444953 TGCAGGCGCGCTACAGCCTGAGAGATGAATTTCCTCTGCTGACAACCAAACGTGTTTTCT 32444894
Query 18646 GGAGGGCCGTCGTGGAAGAGTTGTTATGGTTTATCCGCGGGTCAACCGATTCCAAAGAAC 18705
||| | || |||||||| |||| ||||||||| || || || || | || ||||
Sbjct 32444893 GGAAAGGTGTTTTGGAAGAGCTGTTGTGGTTTATCAAGGGATCCACAAATGCTAATGAAC 32444834
Query 18706 TCGCCGCTAAAGATATACACATATGGGATATATACGGATCGAGCAAATTTCTAAATAGGA 18765
| | | |||| | | | || |||||| | || || | | ||| | | ||
Sbjct 32444833 TGTCTTCCAAAGGTGTGAAAATTTGGGATGCCAATGGTTCCCGAGACTTTTTGGACAGCC 32444774
Query 18766 ATGGCTTCCATAAAAGACACACGGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGAC 18825
|| ||| || ||| | || || | ||||| |||| ||||| |||||| |||
Sbjct 32444773 TGGGGTTCTCCAACAGAGAAGAAGGAGATTTAGGCCCTGTTTATGGCTTTCAGTGGCGAC 32444714
Query 18826 ATTTTGGAGCGGAATATAAAGACTGTCAATCAAACTATTTACAGCAAGGAATCGATCAGC 18885
||||||| || ||||| ||||| | ||| | |||| | |||||| | |||||||
Sbjct 32444713 ATTTTGGGGCAGAATACAAAGATAAAGATTCAGATTATTCAGGTCAAGGAGTAGATCAGC 32444654
Query 18886 TGCAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGT 18945
|||||| || || || ||||| ||||| |||||||| | || |||| || | |
Sbjct 32444653 TGCAAAAAGTGATCGACACAATCAAAACCAACCCAGATGACAGAAGAATCATCCTGTGTG 32444594
Query 18946 CTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGT 19005
||||||||||||| ||| | || | |||| |||||||||| || | | || ||||
Sbjct 32444593 CTTGGAATCCAAAAGATCTTCCTCTGATGGCCTTACCTCCATGCCATGCACTTTGCCAGT 32444534
Query 19006 TTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCC 19065
| || || | || ||||| | |||||||| || ||||||| || || || |||||||
Sbjct 32444533 TCTATGTGGTGAATGGTGAGCTCTCCTGCCAGCTACACCAGAGGTCAGGAGACATGGGCC 32444474
Query 19066 TTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTA 19125
| || || || ||||| ||||| | || | || || |||| ||| | ||||| | |
Sbjct 32444473 TGGGTGTGCCCTTCAATATTGCCAGCTACTCCCTGCTCACCTGCATGATTGCGCACATCA 32444414
Query 19126 CAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATC 19185
| || || || |||| ||||| | |||||| |||| |||||||| |||||| ||||||
Sbjct 32444413 CCGGCCTGAAGCCCGGCGATTTTGTACATACATTGGGAGATGCACACATTTACCTGAATC 32444354
Query 19186 ATATAGATGCTTTAAAAGTGCAGCTAGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAAA 19245
| || || || ||||||||||||| ||| |||| |||||||| || ||||
Sbjct 32444353 ACATTGAGCCTCTAAAAGTGCAGCTTCAGCGAGAACCAAGGCCTTTTCCAAAGCTCAAAA 32444294
Query 19246 TTATTCGAAATGT 19258
| ||||||| ||
Sbjct 32444293 TCCTTCGAAAAGT 32444281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399494067331800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |