Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq20 100 3e-16
>seq20
Length=39541208
Score = 100 bits (110), Expect = 3e-16
Identities = 90/113 (80%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
|||||||| ||| | || ||||||||||| || ||| | |||||||| || |||| |||
Sbjct 37617176 GAGCCGCTCCTGAGGGAAAACCCCCGCCGCTTTGTGGTCTTCCCCATCCAGTACCACGAC 37617117
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688
|| |||| ||||| || ||||| ||||| || || ||||| | |||||||||
Sbjct 37617116 ATCTGGCAGATGTATAAGAAGGCGGAGGCCTCCTTTTGGACAGCCGAGGAGGT 37617064
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 117032 GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCC 117091
|| ||||| |||||||||||||||| || || || ||||||| || || ||| ||
Sbjct 37615307 GGAGAGCGGGTGGTGGCCTTCGCGGCAGTGGAAGGAATCTTCTTCTCTGGTTCTTTTGCG 37615248
Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151
|||| || ||||||||||||||||| | ||||| ||||| || || ||| || ||
Sbjct 37615247 TCCATTTTCTGGCTCAAGAAACGCGGGTTGATGCCTGGCCTCACATTTTCCAATGAACTT 37615188
Query 117152 ATCTCCAGGGACGAGG 117167
|| ||| || ||||
Sbjct 37615187 ATTAGCAGAGATGAGG 37615172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515206061910400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |