Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01] 2,040 sequences; 1,769,662,895 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 1e-11 >seq1 Length=89887394 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/133 (76%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 |||||||||||||| ||| | || || || |||||||| || |||||| | || || || Sbjct 32413847 GCATTTTTTGGAGCCCAGATGAACTCCTTCATCCATGTGATCATGTACTCGTACTACGGG 32413788 Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174 | | || |||||| ||| ||||| |||||||| ||||||||||| || || || | Sbjct 32413787 TTAACTGCACTTGGTCC-ATGGATTCAG-AAGTATCTTTGGTGGAAACGATACCTGACCA 32413730 Query 52175 TAATGCAGTTGGT 52187 | ||||| |||| Sbjct 32413729 TGCTGCAGCTGGT 32413717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923173258481600