Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq1 86.0 1e-11
>seq1
Length=89887394
Score = 86.0 bits (94), Expect = 1e-11
Identities = 101/133 (76%), Gaps = 4/133 (3%)
Strand=Plus/Minus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||| | || || || |||||||| || |||||| | || || ||
Sbjct 32413847 GCATTTTTTGGAGCCCAGATGAACTCCTTCATCCATGTGATCATGTACTCGTACTACGGG 32413788
Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174
| | || |||||| ||| ||||| |||||||| ||||||||||| || || || |
Sbjct 32413787 TTAACTGCACTTGGTCC-ATGGATTCAG-AAGTATCTTTGGTGGAAACGATACCTGACCA 32413730
Query 52175 TAATGCAGTTGGT 52187
| ||||| ||||
Sbjct 32413729 TGCTGCAGCTGGT 32413717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923173258481600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |