Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq23 284 1e-71
>seq23
Length=36106517
Score = 284 bits (314), Expect = 1e-71
Identities = 516/755 (68%), Gaps = 0/755 (0%)
Strand=Plus/Minus
Query 19978 GATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATATAACTTGAGA 20037
|| || || || || || || | || || || || |||| | || || | | |||||
Sbjct 32444990 GACCGCACGGGCACCGGCACCCTGTCGGTGTTCGGCCTGCAGGCGCGCTACAGCCTGAGA 32444931
Query 20038 AATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTA 20097
|||||||||| | | || || ||||| || || |||||||| ||| | |||||| |
Sbjct 32444930 GATGAATTTCCTCTGCTGACAACCAAACGTGTTTTCTGGAAAGGTGTTTTGGAAGAGCTG 32444871
Query 20098 TTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATT 20157
|| |||||||| || ||||| |||||| ||| || || ||||| || || |||
Sbjct 32444870 TTGTGGTTTATCAAGGGATCCACAAATGCTAATGAACTGTCTTCCAAAGGTGTGAAAATT 32444811
Query 20158 TGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAG 20217
||| || |||| || | ||||| ||||| || || |||| | ||||
Sbjct 32444810 TGGGATGCCAATGGTTCCCGAGACTTTTTGGACAGCCTGGGGTTCTCCAACAGAGAAGAA 32444751
Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277
|| ||||| || ||||| ||||| ||||| ||| |||||||||| || ||||| ||
Sbjct 32444750 GGAGATTTAGGCCCTGTTTATGGCTTTCAGTGGCGACATTTTGGGGCAGAATACAAAGAT 32444691
Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337
| | || |||||| || |||||||||||||| | ||||| || || | |||
Sbjct 32444690 AAAGATTCAGATTATTCAGGTCAAGGAGTAGATCAGCTGCAAAAAGTGATCGACACAATC 32444631
Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397
||||| |||||| | ||||||||||| || | || || ||||| | |||||| | |||
Sbjct 32444630 AAAACCAACCCAGATGACAGAAGAATCATCCTGTGTGCTTGGAATCCAAAAGATCTTCCT 32444571
Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTG 20457
| ||||| || |||||||| ||| || ||||| || || || | ||| ||| |
Sbjct 32444570 CTGATGGCCTTACCTCCATGCCATGCACTTTGCCAGTTCTATGTGGTGAATGGTGAGCTC 32444511
Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517
|| || || | | || | || | || ||||| |||||||| || |||||||||||
Sbjct 32444510 TCCTGCCAGCTACACCAGAGGTCAGGAGACATGGGCCTGGGTGTGCCCTTCAATATTGCC 32444451
Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTA 20577
|| || | ||||| || | |||||||| || | || | | || | || || ||
Sbjct 32444450 AGCTACTCCCTGCTCACCTGCATGATTGCGCACATCACCGGCCTGAAGCCCGGCGATTTT 32444391
Query 20578 GTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAG 20637
|| || || | ||||| || || |||||||| ||||| || || ||| ||||| | |||
Sbjct 32444390 GTACATACATTGGGAGATGCACACATTTACCTGAATCACATTGAGCCTCTAAAAGTGCAG 32444331
Query 20638 TTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATATT 20697
| ||| |||||| | || |||| || || ||||| ||| | |||
Sbjct 32444330 CTTCAGCGAGAACCAAGGCCTTTTCCAAAGCTCAAAATCCTTCGAAAAGTTGAGACGATT 32444271
Query 20698 AACGATTTTAAAGCTGATGATTTTGTGTTAGAAGG 20732
| || || |||||||| || |||| | |||||||
Sbjct 32444270 GATGACTTCAAAGCTGAAGACTTTGAGATAGAAGG 32444236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399174075287800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |