Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq15 111 1e-19
>seq15
Length=51729835
Score = 111 bits (122), Expect = 1e-19
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| || ||| || |||||||| | ||| || || || ||||| || || || ||
Sbjct 36819511 ACCTCATCCTTGCTGGTATACTCTACTACTTCCGTGCACAGGTTGCTGCATTTGATTGTT 36819570
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|||| || |||||||||||| ||||| || ||||| |||||||||||||| || |||
Sbjct 36819571 CCCAGGTTCTGCTGGTTGCTTTTCCGATTACAGGAATCTTTGTAGAGCATGTATGGTGTG 36819630
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| || || ||| ||||| ||||||||
Sbjct 36819631 CCTGTTTCTGTCTGAGACTCAATGATCGC 36819659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445755032956800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |