Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01] 2,040 sequences; 1,769,662,895 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq18 122 8e-23 >seq18 Length=42608043 Score = 122 bits (134), Expect = 8e-23 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || || || |||||||| |||||||||||||| ||||||||| Sbjct 42005973 GGTTACCTGGGTTGCCAAGCCCTGTCAGAGATGATCCAGTTTTACTTGGACGAGGTGATG 42005914 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 |||||||| || || ||| | || || |||| ||||| || ||||| ||||| || ||| Sbjct 42005913 CCGCAGGCTGAGAACCACAGCCCAGATGTCAAGGAGCATGTGAACTCCCTGGGTGAGAAG 42005854 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 || | | || | || ||||||| ||||| Sbjct 42005853 CTGCAGTCCCTCAGGCTGAGACTGCGACGCTG 42005822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447738982364800