Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01] 2,040 sequences; 1,769,662,895 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq18 105 6e-18 >seq18 Length=42608043 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| ||||| |||||||| ||||| ||| | || ||||| ||||| ||||| Sbjct 42005964 GGTTGCCAAGCCCTGTCAGAGATGATCCAGTTTTACTTGGACGAGGTGATGCCGCAGGCT 42005905 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || ||| | || || | || || || || || ||||||||||| |||||| || | Sbjct 42005904 GAGAACCACAGCCCAGATGTCAAGGAGCATGTGAACTCCCTGGGTGAGAAGCTGCAGTCC 42005845 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | || || ||||||| ||||| Sbjct 42005844 CTCAGGCTGAGACTGCGACGCTG 42005822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430043707772480