Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq18 105 6e-18
>seq18
Length=42608043
Score = 105 bits (116), Expect = 6e-18
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230
|| |||||||| ||||| |||||||| ||||| ||| | || ||||| ||||| |||||
Sbjct 42005964 GGTTGCCAAGCCCTGTCAGAGATGATCCAGTTTTACTTGGACGAGGTGATGCCGCAGGCT 42005905
Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290
|| || ||| | || || | || || || || || ||||||||||| |||||| || |
Sbjct 42005904 GAGAACCACAGCCCAGATGTCAAGGAGCATGTGAACTCCCTGGGTGAGAAGCTGCAGTCC 42005845
Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313
| || || ||||||| |||||
Sbjct 42005844 CTCAGGCTGAGACTGCGACGCTG 42005822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430043707772480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |