Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01] 2,040 sequences; 1,769,662,895 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq23 102 1e-16 >seq23 Length=36106517 Score = 102 bits (112), Expect = 1e-16 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 7007 CATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGAT 7066 |||| || || || | | |||| ||||||||||| | | || | ||| ||||| Sbjct 32444528 CATAGAACTGGCAAAGTGCATGGCATGGAGGTAAGGCCATCAGAGGAAGATCTTTTGGAT 32444587 Query 7067 TCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGT-TATAATT 7125 |||||||| || | || | ||| |||| ||| ||| |||| ||| ||| || | | Sbjct 32444588 TCCAAGCACACAGGATGATTCTTCTGTCATCTGG-GTTGGTTTTGATTGTGTCGATCACT 32444646 Query 7126 ATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCT 7185 |||| | ||||||| || |||||| ||||| | || || | | || | || Sbjct 32444647 TTTTGCAGCTGATCTACTCCTTGACCTGAATAATCTGAATCTTTATCTTTGTATTCTGCC 32444706 Query 7186 CCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTC 7235 |||||||||| ||| ||||| ||||||| ||| |||||||| |||||||| Sbjct 32444707 CCAAAATGTCGCCACTGAAAGCCATAAACAGGGCCTAAATCTCCTTCTTC 32444756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595856805264000