Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq23 102 1e-16
>seq23
Length=36106517
Score = 102 bits (112), Expect = 1e-16
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 7007 CATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGAT 7066
|||| || || || | | |||| ||||||||||| | | || | ||| |||||
Sbjct 32444528 CATAGAACTGGCAAAGTGCATGGCATGGAGGTAAGGCCATCAGAGGAAGATCTTTTGGAT 32444587
Query 7067 TCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGT-TATAATT 7125
|||||||| || | || | ||| |||| ||| ||| |||| ||| ||| || | |
Sbjct 32444588 TCCAAGCACACAGGATGATTCTTCTGTCATCTGG-GTTGGTTTTGATTGTGTCGATCACT 32444646
Query 7126 ATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCT 7185
|||| | ||||||| || |||||| ||||| | || || | | || | ||
Sbjct 32444647 TTTTGCAGCTGATCTACTCCTTGACCTGAATAATCTGAATCTTTATCTTTGTATTCTGCC 32444706
Query 7186 CCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTC 7235
|||||||||| ||| ||||| ||||||| ||| |||||||| ||||||||
Sbjct 32444707 CCAAAATGTCGCCACTGAAAGCCATAAACAGGGCCTAAATCTCCTTCTTC 32444756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595856805264000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |