Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01] 2,040 sequences; 1,769,662,895 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq8 114 9e-21 seq21 105 4e-18 >seq8 Length=64163821 Score = 114 bits (126), Expect = 9e-21 Identities = 83/96 (86%), Gaps = 5/96 (5%) Strand=Plus/Minus Query 25901 TAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCG 25955 || ||||||||||||||||||||||||||| |||||||| ||||| || |||||| Sbjct 6351007 TAGGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCA 6350948 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 || |||| ||||||||||| |||||||||||||||| Sbjct 6350947 TTCATCCATTCATGCGCGTGACTAATTAGATGACGA 6350912 >seq21 Length=39324707 Score = 105 bits (116), Expect = 4e-18 Identities = 79/93 (85%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| ||||||||||||||||||| ||| |||||||| ||||| || ||||||| Sbjct 17572415 AAGCCGGTTCCCTTGGCTGTGGTTTGGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGC 17572356 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 | |||| |||||||| ||||||||||||||||| Sbjct 17572355 TCATCCATTCATGCGTGTCACTAATTAGATGAC 17572323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334938872375240