Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01] 2,040 sequences; 1,769,662,895 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq20 87.8 2e-12 >seq20 Length=39541208 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 133396 ACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAA 133455 ||||||||| | |||||||| || ||||| || || || ||||| ||| ||||| Sbjct 37617064 ACCTCCTCGGCTGTCCAAAAGGAGGCCTCCGCCTTCTTATACATCTGCCAGATGTCGTGG 37617123 Query 133456 TATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTCCGC 133511 || || ||||| || | |||||| |||||||||||||| | || |||||||| || Sbjct 37617124 TACTGGATGGGGAAGACCACAAAGCGGCGGGGGTTTTCCCTCAGGAGCGGCTCGGC 37617179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500160045593600