Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_015049.1
Length=124335
Score E
Sequences producing significant alignments: (Bits) Value
seq171 98.7 8e-16
seq61 91.5 1e-13
seq55 91.5 1e-13
seq201 89.7 4e-13
seq131 87.8 1e-12
seq195 86.0 5e-12
seq67 82.4 6e-11
>seq171
Length=12832
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/203 (71%), Gaps = 8/203 (4%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || ||| | ||||| | | ||| || | | ||||
Sbjct 5395 CCTCATGCTGCACATGGCACGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCTG 5454
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || ||||||| || | || ||||| ||||||||| |||| ||||
Sbjct 5455 CCCACTTCTGGAAGGTTCCATTGCCCCCAGGCCTGGTGTCCACCTGCTCCACGTTCTCAG 5514
Query 469 TCAGTTGCTCTGCTCCCAT----GTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524
|||| | ||| ||||| ||||| || | ||| ||| ||||||| ||||||||
Sbjct 5515 TCAGGTTCTC----CCCATCTCGCTGCCAGGTCAGGGTGATGCCCGCAGGGTAGAAGCCC 5570
Query 525 GTGGCCCAACATTTTAGTGTTAC 547
|||||| ||||| || || ||
Sbjct 5571 AAGGCCCAGCATTTCAGGGTGAC 5593
>seq61
Length=822949
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/214 (70%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || ||| | ||||| | | |||||| | | ||||
Sbjct 694692 CCTCATGCTGCACATGGCACGTGTATCTCTGCTCCTCTCCAGAAGGTACCACCACAGCTG 694751
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || ||||| || || | || ||||| |||||| || || | | |
Sbjct 694752 CCCACTTCTGGAAGGTTCCGTCCCCCCCAGGCCTGGTGTCCACCAGCTCCGTGTCCTGGG 694811
Query 469 TCAGTTGCTCTGCTCCCAT----GTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524
|||| | ||| ||||| ||||| || | ||| ||||||||||| ||||||||
Sbjct 694812 TCAGGTCCTC----CCCATCTCGCTGCCAGGTCAGGGTGATGTCCGCAGGGTAGAAGCCC 694867
Query 525 GTGGCCCAACATTTTAGTGTTACTTGACGGTCAG 558
|||||| || || || || || | | ||||||
Sbjct 694868 AGGGCCCAGCACTTCAGGGTGACCTCATGGTCAG 694901
>seq55
Length=1670966
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | |||||||| |||||| | || || | | | | | || ||| || |
Sbjct 298437 CCTCATGCTGCACATGACACGTATATCTCTGTTCCTCTCGGGAAAGCACCACTAGAGCAG 298496
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||| | ||| || |||||||||||| | || ||||| |||||| || || | | |
Sbjct 298497 CCCATTCCTGGAAGGTTCCATCTCCACCAGGCCTGGTGTCCACCAGCTTCATGTCCTGGG 298556
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|||| | ||| | | | ||||| || | ||| || ||| |||| |||||||| ||
Sbjct 298557 TCAGGTTCTCCCCATCTCTCTGCCAGGTCAGGGTGATCTCCTCAGGGTAGAAGCCCAGGG 298616
Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAG 558
|||| ||||| || || || | ||||||
Sbjct 298617 CCCAGCATTTCAGGGTGACATTCTGGTCAG 298646
Score = 87.8 bits (96), Expect = 1e-12
Identities = 148/214 (69%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | || || || || ||| | ||||| | | ||| || | | ||||
Sbjct 572654 CCTCATGCTGCACCTGGCACGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCTG 572713
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
||||||||||||| ||||| || || | || ||||| |||||| || ||| | | |
Sbjct 572714 CCCACTTCTGAAAGGTTCCGTCACCTCCAGGCCTGGTGTCCACCAGCTCCATGTCCTGGG 572773
Query 469 TCAGTTGCTCTGCTCCCAT----GTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524
|||| | ||| ||||| ||||| || | ||| || |||||||| ||||||||
Sbjct 572774 TCAGGTTCTC----CCCATCTCGCTGCCAGGTCAGGGTGATCTCCGCAGGGTAGAAGCCC 572829
Query 525 GTGGCCCAACATTTTAGTGTTACTTGACGGTCAG 558
|||||| ||||| || || || | | ||| ||
Sbjct 572830 AGGGCCCAGCATTTCAGGGTGACCTCATGGTTAG 572863
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/217 (69%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || ||| | ||||| | | ||| || | | ||||
Sbjct 833607 CCTCATGCTGCACATGGCATGTGTATCTCTGCTCCTCTCCAGAAGGGACCACCACAGCTG 833666
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || ||||||||||| | || ||||| |||||| || ||| | | |
Sbjct 833667 CCCACTTCTGGAAGGTTCCATCTCCCCCAGGCCTGGTGTCCACCAGCTCCATGTCCTGGG 833726
Query 469 TCAGTTGCTCTGCTCCCAT----GTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524
|||| | ||| ||||| ||||| || | ||| || |||||||| ||||||||
Sbjct 833727 TCAGGTTCTC----CCCATCTCGCTGCCAGGTCAGGGTGATCTCCGCAGGGTAGAAGCCC 833782
Query 525 GTGGCCCAACATTTTAGTGTTACTTGACGGTCAGGTG 561
|||||| || | || || || | | | |||| ||
Sbjct 833783 AGGGCCCAGCACCTCAGGGTGACCTCATGCTCAGATG 833819
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/191 (70%), Gaps = 8/191 (4%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || | ||| | ||||| | | ||| || | | ||||
Sbjct 642759 CCTCATGCTGCACATGGCACATGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCTG 642818
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || ||||||||||| | || ||||| ||||||||| ||| | | |
Sbjct 642819 CCCACTTCTGGAAGGTTCCATCTCCCCCAGGCCTGGTCTCCACCTGCTCCATGTCCTGGG 642878
Query 469 TCAGTTGCTCTGCTCCCAT----GTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524
|||| | ||| ||||| ||||| || | ||| || |||||||| ||||||||
Sbjct 642879 TCAGGTTCTC----CCCATCTCGCTGCCAGGTCAGGGTGATCTCCGCAGGGTAGAAGCCC 642934
Query 525 GTGGCCCAACA 535
|||||| ||
Sbjct 642935 AGGGCCCAGCA 642945
>seq201
Length=17586
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/203 (70%), Gaps = 8/203 (4%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || ||| | ||||| | | ||| || | | ||||
Sbjct 7674 CCTCATGCTGCACATGGCACGTGTATCTCTGCTCCTCTCCAGGAGGCACCACCACAGCTG 7615
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || ||||||| || | || ||||| |||||| || |||| || |
Sbjct 7614 CCCACTTCTGGAAGGTTCCATTGCCCCCAGGCCTGGTATCCACCAGCTCCACGTTCTCGG 7555
Query 469 TCAGTTGCTCTGCTCCCAT----GTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524
|||| | ||| ||||| ||||| || | ||| ||| ||||||| ||||||||
Sbjct 7554 TCAGGTTCTC----CCCATCTCGCTGCCAGGTAAGGGTGATGCCCGCAGGGTAGAAGCCC 7499
Query 525 GTGGCCCAACATTTTAGTGTTAC 547
|||||| ||||| || || ||
Sbjct 7498 AGGGCCCAGCATTTCAGGGTGAC 7476
>seq131
Length=60845
Score = 87.8 bits (96), Expect = 1e-12
Identities = 138/194 (71%), Gaps = 8/194 (4%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATG---CTCTTTATGTGCAGGTACTTCTATGG 405
||||||| | |||||||| ||||| | || |||| || | | | || ||| |
Sbjct 6290 CCTCATGCTGCACATGACACATATATCTCTGTTCCTCTCTA---GAAAGCACCACTAGAG 6234
Query 406 CTGCCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCAT 465
| ||||| ||||| || |||||||||||| | || ||||| |||||| || ||| | |
Sbjct 6233 CAGCCCATTTCTGGAAGGTTCCATCTCCACCAGGCCTGGTGTCCACCAGCTCCATGTCCT 6174
Query 466 CAGTCAGTTGCTCTGC-TCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524
||||| | ||| | || | | ||||| || | ||| || |||||||| ||||| ||
Sbjct 6173 TGGTCAGGTTCTCCCCATCTCGT-TGCCAGGTCAGGGTGATCTCCGCAGGGTAGAAACCC 6115
Query 525 GTGGCCCAACATTT 538
|||||| |||||
Sbjct 6114 AGGGCCCAGCATTT 6101
>seq195
Length=16805
Score = 86.0 bits (94), Expect = 5e-12
Identities = 141/203 (69%), Gaps = 8/203 (4%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || ||| | ||||| | | ||| || | | ||||
Sbjct 10104 CCTCATGCTGCACATGGCACGTGTATCTCTGCTCCTCTCCAGGAGGCACCACCACAGCTG 10045
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || ||||||| || | || ||||| |||||| || ||| || |
Sbjct 10044 CCCACTTCTGGAAGGTTCCATTGCCCCCAGGCCTGGTGTCCACCAGCTCCATGTTCTCGG 9985
Query 469 TCAGTTGCTCTGCTCCCAT----GTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524
|||| | ||| ||||| ||||| || | ||| ||| ||||||| ||||||||
Sbjct 9984 TCAGGTTCTC----CCCATCTCGCTGCCAGGTCAGGGTGATGCCCGCAGGGTAGAAGCCC 9929
Query 525 GTGGCCCAACATTTTAGTGTTAC 547
|||||| ||||| || || ||
Sbjct 9928 AGGGCCCAGCATTTGAGGGTGAC 9906
>seq67
Length=640780
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/214 (69%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || ||| | ||||| | | ||| || | | ||||
Sbjct 303895 CCTCATGCTGCACATGGCACGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCTG 303836
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || ||||||||||| | || ||||| |||||| || | | | |
Sbjct 303835 CCCACTTCTGGAAGGTTCCATCTCCCCCAGGCCTGGTGTCCACCAGCTCTGTGTCCTGGG 303776
Query 469 TCAGTTGCTCTGCTCCCAT----GTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524
|||| | ||| ||||| ||||| || | ||| || |||||||| ||||||||
Sbjct 303775 TCAGGTTCTC----CCCATCTCGCTGCCAGGTCAGGGTGATCTCCGCAGGGTAGAAGCCC 303720
Query 525 GTGGCCCAACATTTTAGTGTTACTTGACGGTCAG 558
|||||| || || || || || | | | ||||
Sbjct 303719 AGGGCCCAGCACTTCAGGGTGACCTCATGCTCAG 303686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397737311010240
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